Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G05
         (920 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-1|CAB04873.1|   75|Caenorhabditis elegans Hypothetical pr...    60   3e-09
U41556-2|ABS19475.1|  369|Caenorhabditis elegans Cysteine protea...    29   6.2  

>Z82059-1|CAB04873.1|   75|Caenorhabditis elegans Hypothetical
           protein T27E9.2 protein.
          Length = 75

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 30/65 (46%), Positives = 34/65 (52%)
 Frame = +2

Query: 236 VDPQQSLREECSQKPDAQNMWAKYQECNDRVNSRSKTAETCEEELIDYVHVLDKCVTKDL 415
           VD     RE C+         +   ECNDRVNSRS T ETC +E+ DYVH LD C     
Sbjct: 13  VDQLTQYRERCADH--VTEFKSILDECNDRVNSRSNTEETCHQEMADYVHHLDHCAMPKA 70

Query: 416 FKRLK 430
           F  LK
Sbjct: 71  FASLK 75


>U41556-2|ABS19475.1|  369|Caenorhabditis elegans Cysteine protease
           related protein6, isoform c protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 299 AKYQECNDRVNSRSKTAETCEEELIDYVH 385
           A Y  CND + S  + AE   ++LIDYV+
Sbjct: 13  AAYCACNDNLESVLEAAELDGDDLIDYVN 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,154,857
Number of Sequences: 27780
Number of extensions: 207256
Number of successful extensions: 482
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)