Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G04
         (944 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   2.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   5.8  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   7.7  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 686  LXKSQAVSPWKAPLVRSPVPDPCRFTGIPXP-PFXPSGXGGG 808
            L K Q V+P   P + +P  +P   +  P P PF  SG GGG
Sbjct: 1075 LIKPQ-VTPATPPALTTPPTEPIS-SATPAPGPFVISGNGGG 1114


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 744 GTGERTRGAFQGETAWDFXSPVG 676
           G+G R RG   G+   D+ +P+G
Sbjct: 51  GSGGRRRGRMGGKQPKDYSAPIG 73


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +2

Query: 722 PLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGI 841
           P +  P P P    G+P  P    G  G   P PPP+ G+
Sbjct: 81  PTMNMP-PRPGMIPGMPGAPPLLMGPNG---PLPPPMMGM 116


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 761 TGIPXPPFXPSGXGGGXSPXPPP 829
           TG+P P       G G  P PPP
Sbjct: 766 TGMPSPSRSAFADGIGSPPPPPP 788


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,340
Number of Sequences: 2352
Number of extensions: 10277
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)