Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G04
(944 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 40 0.002
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 36 0.030
At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family... 36 0.052
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 34 0.16
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 34 0.16
At1g61080.1 68414.m06877 proline-rich family protein 34 0.16
At1g59750.1 68414.m06727 auxin-responsive factor (ARF1) identica... 34 0.16
At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family... 32 0.48
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 32 0.48
At4g23882.1 68417.m03434 heavy-metal-associated domain-containin... 32 0.64
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 31 1.1
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 31 1.5
At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protei... 29 3.4
At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protei... 29 3.4
At4g29910.1 68417.m04256 origin recognition complex subunit 5-re... 29 3.4
At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family... 29 3.4
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 29 3.4
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 29 4.5
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 29 4.5
At4g03120.1 68417.m00425 proline-rich family protein similar to ... 29 4.5
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 4.5
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 29 4.5
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 29 4.5
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 5.9
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 29 5.9
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 29 5.9
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 5.9
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 29 5.9
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 29 5.9
At1g66290.1 68414.m07528 F-box family protein contains F-box dom... 29 5.9
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 28 7.8
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 28 7.8
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 710 PWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXG 883
P PL ++P P P + P PP P G G G S PPPL ++ PP G
Sbjct: 717 PPPPPLSKTPAPPPPPLSKTPVPP-PPPGLGRGTSSGPPPLGAKGSNAPPPPPPAGRG 773
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/65 (32%), Positives = 24/65 (36%)
Frame = +2
Query: 710 PWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWG 889
P L P P P + P PP P +P PPP G+ G S PP G
Sbjct: 706 PSSTRLGAPPPPPPPPLSKTPAPPPPPLSK----TPVPPPPPGLGR-GTSSGPPPLGAKG 760
Query: 890 XXNPP 904
PP
Sbjct: 761 SNAPP 765
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 4/69 (5%)
Frame = +2
Query: 677 PTGLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPP----FXPSGXGGGXSPXPPPLXGIS 844
PT S V P P P P + P PP PS G +P PPP +S
Sbjct: 665 PTSHSGSIRVGPPSTPPPPPPPPPKANISNAPKPPAPPPLPPSSTRLG-APPPPPPPPLS 723
Query: 845 NSGVRSXPP 871
+ PP
Sbjct: 724 KTPAPPPPP 732
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 36.3 bits (80), Expect = 0.030
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +2
Query: 704 VSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPP----LXGISNSGVRSXPP 871
V P P P P P + + P PP P G SP PPP +S+S + PP
Sbjct: 237 VKPDPTPPPPPPPPIPVKQSATPPPPPPPKLKNNGPSPPPPPPLKKTAALSSSASKKPPP 296
Query: 872 QXXG 883
G
Sbjct: 297 APRG 300
>At5g49280.1 68418.m06099 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 162
Score = 35.5 bits (78), Expect = 0.052
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 719 APLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQ-XXGWGXX 895
+P SP P T P PP PS GG PPP S G + PP G G
Sbjct: 49 SPPPPSPPPPSTPTTACPPPPSPPSSGGGSSYYYPPP--SQSGGGSKYPPPYGGGGQGYY 106
Query: 896 NPP 904
PP
Sbjct: 107 YPP 109
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/71 (38%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +2
Query: 704 VSPWKAPLVRSPVPDPCRFTGI----PXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPP 871
VS KA PVP P + P PP P G GG P PPP G G R PP
Sbjct: 362 VSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPPGSGG---PKPPPPPG--PKGPRPPPP 416
Query: 872 QXXGWGXXNPP 904
G PP
Sbjct: 417 MSLGPKAPRPP 427
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 33.9 bits (74), Expect = 0.16
Identities = 27/71 (38%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +2
Query: 704 VSPWKAPLVRSPVPDPCRFTGI----PXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPP 871
VS KA PVP P + P PP P G GG P PPP G G R PP
Sbjct: 362 VSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPPGSGG---PKPPPPPG--PKGPRPPPP 416
Query: 872 QXXGWGXXNPP 904
G PP
Sbjct: 417 MSLGPKAPRPP 427
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +2
Query: 737 PVPDPCRFTGIPXPPFXPSGXGG-GXSPXPPPLXGISNSGVRSXPPQXXGW--GXXNPP 904
P P P P PP P G G G P PPP ++N PP G PP
Sbjct: 564 PPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPPMAMANGAAGPP 622
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = +2
Query: 731 RSPVPDPCRF----TGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXN 898
R+P P P +G P PP P G +P PPP +G PP G N
Sbjct: 573 RAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPPMAMANGAAGPPPPPPRMGMAN 632
Score = 31.9 bits (69), Expect = 0.64
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +2
Query: 737 PVPDPCRFTGIPXPPFXPSGXGGGXS--PXPPPLXGISNSGVRSXPP 871
P P P P PP P G + P PPP G++N PP
Sbjct: 594 PPPMPLANGATPPPPPPPMAMANGAAGPPPPPPRMGMANGAAGPPPP 640
Score = 31.5 bits (68), Expect = 0.84
Identities = 19/65 (29%), Positives = 22/65 (33%)
Frame = +2
Query: 710 PWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWG 889
P +A + P P P P PP P G P PPP + N P G
Sbjct: 529 PPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPPPPPPP--PMQNRAPSPPPMPMGNSG 586
Query: 890 XXNPP 904
PP
Sbjct: 587 SGGPP 591
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +2
Query: 737 PVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXNPP 904
P P P R P PP P G P PPP G + PP PP
Sbjct: 525 PPPPPPRAAVAPPPPPPPPGTAAAPPPPPPP-PGTQAAPPPPPPPPMQNRAPSPPP 579
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/56 (28%), Positives = 18/56 (32%)
Frame = +2
Query: 737 PVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXNPP 904
P P P P PP P SP P P+ + G PP PP
Sbjct: 551 PPPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPP 606
Score = 28.3 bits (60), Expect = 7.8
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 701 AVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXX 880
A P K P P P T PP P P PPP G + PP
Sbjct: 499 AFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPPG--TAAAPPPPPPPP 556
Query: 881 GWGXXNPP 904
G PP
Sbjct: 557 GTQAAPPP 564
>At1g59750.1 68414.m06727 auxin-responsive factor (ARF1) identical
to auxin response factor 1 GI:2245378 from [Arabidopsis
thaliana]
Length = 665
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +2
Query: 665 RWGXPTGLXKSQAVSPWKA-PLVR----SPVPDPCRFTGIPXPPFXPSGXGGGXSPXPP 826
+W P+ + + + VSPW+ PLV S P P + P PP PS G P P
Sbjct: 334 QWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPGLPSPATGPSGPVTP 392
>At3g06750.1 68416.m00800 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 147
Score = 32.3 bits (70), Expect = 0.48
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 743 PDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQ-XXGWGXXNPP 904
P P ++ P PP SG GG PPP S+ GV+ PP G+G PP
Sbjct: 44 PVPSSYSPPPPPPSS-SGGGGSYYYSPPP--PSSSGGVKYPPPYGGDGYGGYYPP 95
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +2
Query: 734 SPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXNPP 904
SP P P P PP P G +P PPP G +G PP G PP
Sbjct: 383 SPPPPPPPSAAAPPPP--PPPKKGPAAPPPPPPPGKKGAGPPPPPPMSKK-GPPKPP 436
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 677 PTGLXKSQAVSPWKAPLVRSPVPDPCRFTG-IPXPPFXPSGXGGGXSPXPPPL 832
P G + P P +P P P G PP P G G P PPP+
Sbjct: 375 PPGPANQTSPPPPPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPPM 427
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/76 (32%), Positives = 27/76 (35%)
Frame = +2
Query: 677 PTGLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGV 856
P L Q + P A L S P +FT PP P G SP PPP S
Sbjct: 340 PVSLPPGQYM-PGNAALSASTPLTPGQFTTANAPP-APPGPANQTSPPPPP----PPSAA 393
Query: 857 RSXPPQXXGWGXXNPP 904
PP G PP
Sbjct: 394 APPPPPPPKKGPAAPP 409
>At4g23882.1 68417.m03434 heavy-metal-associated domain-containing
protein
Length = 284
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 698 QAVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISN 847
QAV + P+ P P P F G P PP+ +G P PP + N
Sbjct: 230 QAVPGFTTPI---PYPPPSFFPGRPPPPYTGAGMFQSAPPQSPPYFPVPN 276
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 707 SPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPP 829
SP P+ S P P +P PP PSG SP P P
Sbjct: 90 SPPMMPMTPSTSPSPLTVPDMPSPPM-PSGMESSPSPGPMP 129
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +2
Query: 677 PTGLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPP 829
P+ L + SP P P P P +P PP PS G SP P P
Sbjct: 171 PSPLPPPPSPSPTPGPDSPLPSPGPDSPLPLPGPPPSPSPTPGPDSPLPSP 221
>At5g58470.2 68418.m07323 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 804 GAFXXXPPPXX-VSXIPGLGXXPPXXGGGVPXTPPXXPXXXGP 929
G++ PPP + G G PP G G+ PP GP
Sbjct: 176 GSYGQAPPPAAAIPSYDGSGSYPPPTGYGMEAVPPPTSYSGGP 218
>At5g58470.1 68418.m07322 zinc finger (Ran-binding) family protein
weak similarity to SP|Q01844 RNA-binding protein EWS
(EWS oncogene) (Ewing sarcoma breakpoint region 1
protein) {Homo sapiens}; contains Pfam profiles PF00076:
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain),
PF00641: Zn-finger in Ran binding protein and others
Length = 422
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +3
Query: 804 GAFXXXPPPXX-VSXIPGLGXXPPXXGGGVPXTPPXXPXXXGP 929
G++ PPP + G G PP G G+ PP GP
Sbjct: 176 GSYGQAPPPAAAIPSYDGSGSYPPPTGYGMEAVPPPTSYSGGP 218
>At4g29910.1 68417.m04256 origin recognition complex subunit
5-related (ORC5) contains weak similarity to Origin
recognition complex subunit 5 (Swiss-Prot:Q9WUV0) [Mus
musculus]
Length = 534
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 634 RASQKSTLKSEVGXPDRTXKIPGXFPLE 717
+AS+KS K E+ + K PG FPLE
Sbjct: 412 KASEKSMEKKEIAEQEAVMKGPGSFPLE 439
>At2g32600.1 68415.m03980 hydroxyproline-rich glycoprotein family
protein similar to SWISS-PROT:Q15428
Length = 277
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +2
Query: 737 PVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXN 898
P P P P PP PSG P PPP+ +N+G R PP G+G N
Sbjct: 231 PPPPPPPHQAQPPPP-PPSGL---FPPPPPPM---ANNGFRPMPP-AGGFGHPN 276
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/51 (35%), Positives = 18/51 (35%)
Frame = +2
Query: 749 PCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXNP 901
PC P P G GGG PPP G G PP G G P
Sbjct: 29 PCTRPHPPVPKPPQHGGGGGGGSKPPPHHGGKGGG---KPPPHGGKGGGPP 76
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +2
Query: 731 RSPVPDPCRFTGIPXPPFX-PSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGWGXXNPP 904
+SP P P ++ P PP+ PS SP PPP S PP + PP
Sbjct: 246 KSP-PPPYVYSSPPPPPYYSPSPEVSYKSPPPPPYYSPSLEVSYKSPPPLFVYNFPPPP 303
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 29.1 bits (62), Expect = 4.5
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 695 SQAVSPWKAPLVRSPVPDPCRF----TGIPXPPFXPSGXGGGXS-PXPPPLXGISNSGVR 859
SQ++SP PL+ P P RF + P PP P G G S P PP + G +
Sbjct: 81 SQSLSP--PPLITVIHPPPPRFYYFESTPPPPPLSPDGKGSPPSVPSSPPSPKGQSQGQQ 138
Query: 860 SXP 868
P
Sbjct: 139 QPP 141
>At4g03120.1 68417.m00425 proline-rich family protein similar to U1
small nuclear ribonucleoprotein C; contains proline rich
extensin domains, INTERPRO:IPR002965
Length = 207
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +3
Query: 681 QDYXNPRXFPPGKLPSCALRFPTPAXLPEYLXRLSXLRGXGGAFXXXPPPXXVSXIPGLG 860
Q Y P P P A P P ++ + G GG P ++ IPG G
Sbjct: 107 QGYMPPPGVPQMMAPPGAPLPPPPQNGILRPPGMAPIPGQGGG------PPGMAPIPGQG 160
Query: 861 XXPPXXGGGVPXTPPXXPXXXGP 929
PP G+P PP P
Sbjct: 161 GGPPPNYNGLPPPPPYHTNPAAP 183
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +2
Query: 722 PLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQ 874
P V SP P P + P P P PPP+ + + S PP+
Sbjct: 63 PTVSSPPPPPLDSSPPPPPDLTPPPSSPPPPDAPPPIPIVFPPPIDSPPPE 113
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 707 SPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPP 826
SP P+ +SP P P ++ P P + PS SP PP
Sbjct: 222 SPSPKPVYKSP-PPPYVYSSPPPPYYSPSPKPAYKSPPPP 260
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 707 SPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPP 826
SP P+ +SP P P + P P + PS SP PP
Sbjct: 272 SPSPKPIYKSP-PPPYVYNSPPPPYYSPSPKPAYKSPPPP 310
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 707 SPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPP 826
SP P+ +SP P P + P P + PS SP PP
Sbjct: 322 SPSPKPVYKSP-PPPYVYNSPPPPYYSPSPKPAYKSPPPP 360
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 707 SPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPP 826
SP P+ +SP P P + P P + PS SP PP
Sbjct: 397 SPSPKPVYKSP-PPPYIYNSPPPPYYSPSPKPSYKSPPPP 435
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/87 (26%), Positives = 31/87 (35%)
Frame = +2
Query: 644 KNRXSSRRWGXPTGLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXP 823
K+ S+ + P A P + PL S + + +P PP G P P
Sbjct: 184 KSEMVSKSFAPPPPPPPGNAAIPVEPPLTMSAEKES--YAPLPPPP------GRAALPPP 235
Query: 824 PPLXGISNSGVRSXPPQXXGWGXXNPP 904
PPL GV + P G PP
Sbjct: 236 PPLPMAVRKGVAAPPLPPPGTAALPPP 262
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/67 (26%), Positives = 26/67 (38%)
Frame = +2
Query: 704 VSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXG 883
+SP P++ SP P P F+ P P PPP + ++ PP
Sbjct: 141 LSPPPPPVLLSPPPPPVLFSPPPPTVTRPPPPPTITRSPPPPRPQAAAYYKKTPPPPPYK 200
Query: 884 WGXXNPP 904
+G PP
Sbjct: 201 YGRVYPP 207
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +2
Query: 731 RSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPPQXXGW 886
++P P P ++ + PP P PPP V S PP W
Sbjct: 192 KTPPPPPYKYGRVYPPPPPPPQAARSYKRSPPPPPPSKYGRVYSPPPPGKSW 243
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/72 (30%), Positives = 28/72 (38%)
Frame = +2
Query: 617 GSAPLDEXHKNRXSSRRWGXPTGLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSG 796
G AP + R P L +++ P++ LV P P PP PS
Sbjct: 647 GGAPPPPPPPPMLVASRTAPPPHLSHVRSI-PFQTRLVMGTSPLPLLVREGAPPPTLPS- 704
Query: 797 XGGGXSPXPPPL 832
GG P PPPL
Sbjct: 705 MSGGAPPPPPPL 716
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/82 (30%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Frame = +3
Query: 693 NPRXFPPGKLPSCALRFPTPAXLPEYLXRLSXLRGXGGAFXXXPP--------PXXVSXI 848
NP PP PS PT P GG + PP P S
Sbjct: 44 NPSPPPPPSNPSPPPPSPTTTACPP-----PPSSSGGGPYYYYPPASQSGSYRPPPSSSS 98
Query: 849 PGLGXXPPXXGGGVPXTPPXXP 914
G PP GG P TPP P
Sbjct: 99 GGYYYPPPKSGGNYPYTPPPNP 120
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = +2
Query: 677 PTGLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPP-FXPSGXGGGXSPXPPP 829
P K AV P K P V+ P P P P PP P P P P
Sbjct: 43 PVKPPKPPAVKPPKPPAVKPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKP 94
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = +2
Query: 707 SPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPP 871
SP + SP P P P P + P SP PPP V S PP
Sbjct: 500 SPPPPSPIHSPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPVHSPPPPVHSPPP 554
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/49 (26%), Positives = 17/49 (34%)
Frame = +2
Query: 683 GLXKSQAVSPWKAPLVRSPVPDPCRFTGIPXPPFXPSGXGGGXSPXPPP 829
G +Q + P P P P PP+ GG + PPP
Sbjct: 41 GTGSTQPAGYYPQPTGYYPPPSSSNVPNYPSPPYYGGNPSGGYNGPPPP 89
>At1g66290.1 68414.m07528 F-box family protein contains F-box domain
Pfam:PF00646
Length = 453
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -3
Query: 333 KXKPLVXVXCXLXXIXXXXKAXASPIXPNEAFFSPHFXXGLXQIIXVFYQ 184
+ K + C L I + P+ PN +FFS F +I+ F++
Sbjct: 307 RVKTMTIAACTLEVIYDYSRCEPLPLFPNLSFFSVEFYQKRWEILPFFFK 356
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Frame = +2
Query: 722 PLVRSPVPDPCRFTGIPXPPFXPSGXG-----GGXSPXPPPLXGISNSG 853
P R P+P G P PP P G G GG P PPP G G
Sbjct: 668 PSARPPLPG-----GGPPPPPPPPGGGPPPPPGGGPPPPPPPPGALGRG 711
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 767 IPXPPFXPSGXGGGXSPXPPPLXGISNSGVRSXPP 871
+P PP G GGG P PP + G+ G+ PP
Sbjct: 1663 LPAPPMPGMGGGGGYGP-PPQMGGM--PGMPPMPP 1694
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,414,391
Number of Sequences: 28952
Number of extensions: 257291
Number of successful extensions: 1156
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2266029384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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