Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G03
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   2.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   7.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.7  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.7  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.7  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 673 GLNKLLTNLSTLFMIRKLG 617
           GLNK L  L+ +FM+  LG
Sbjct: 131 GLNKKLNTLTVVFMLIALG 149


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 673 GLNKLLTNLSTLFMIRKLG 617
           GLNK L  L+ +FM+  LG
Sbjct: 131 GLNKKLNTLTVVFMLIALG 149


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +3

Query: 276 VAIIGAPNSGKSTLINKI 329
           +AI+G+  +GK+TL+N +
Sbjct: 107 LAILGSSGAGKTTLLNTL 124


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +3

Query: 276 VAIIGAPNSGKSTLINKI 329
           +AI+G+  +GK+TL+N +
Sbjct: 107 LAILGSSGAGKTTLLNTL 124


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 173 PTSNRSHGYYVIYS 132
           P+S  SHG+ VIYS
Sbjct: 445 PSSVLSHGHRVIYS 458


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 487 IEGGRLYFFCS 455
           IE  RL+F+CS
Sbjct: 101 IEANRLFFYCS 111


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 487 IEGGRLYFFCS 455
           IE  RL+F+CS
Sbjct: 101 IEANRLFFYCS 111


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 487 IEGGRLYFFCS 455
           IE  RL+F+CS
Sbjct: 101 IEANRLFFYCS 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,349
Number of Sequences: 336
Number of extensions: 3825
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)