Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G03
(881 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0147 - 28022018-28022104,28022207-28022287,28022513-280226... 75 1e-13
08_01_0709 + 6265949-6266452,6267697-6267786,6268257-6268402,626... 59 5e-09
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 48 1e-05
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 44 1e-04
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 44 2e-04
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 43 4e-04
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 42 5e-04
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 41 0.001
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 39 0.005
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 37 0.019
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 36 0.057
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 36 0.057
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 34 0.13
07_01_0130 - 963856-965454 34 0.13
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 33 0.30
01_06_0536 + 30068881-30070383 33 0.40
12_01_0610 + 5030130-5030247,5030957-5033193 32 0.53
03_06_0179 - 32171712-32171780,32171861-32171920,32172096-321721... 32 0.53
03_02_0267 + 6990674-6990890,6991692-6991761,6991824-6991913,699... 32 0.70
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 31 0.93
07_01_0131 - 966178-966291,966432-967685 31 1.6
01_06_0603 + 30530486-30530984,30531174-30531202,30531484-305316... 31 1.6
07_01_0075 - 558829-560859 30 2.1
06_01_0668 - 4882174-4884204 30 2.1
07_03_1552 - 27648193-27648307,27648384-27648431,27649140-276492... 30 2.8
03_06_0579 + 34870958-34874578 30 2.8
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 29 3.7
11_06_0706 + 26460400-26462254,26462499-26462562,26462929-264629... 29 3.7
11_06_0697 + 26371193-26371397,26371562-26374254 29 3.7
01_01_1085 - 8534269-8534356,8535408-8536042 29 3.7
11_04_0410 - 17347853-17347978,17348289-17348399,17348481-173488... 29 4.9
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 29 4.9
09_02_0099 + 4265550-4265663,4266794-4267024,4267619-4267681,426... 29 6.5
07_01_0129 - 959600-959625,960100-961428,961585-961657,962185-96... 29 6.5
02_01_0301 + 2011707-2015423,2016982-2017182,2017670-2017786,201... 29 6.5
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 28 8.6
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 28 8.6
>05_07_0147 -
28022018-28022104,28022207-28022287,28022513-28022614,
28022701-28022799,28023060-28023185,28023272-28023385,
28023478-28023618,28023717-28023862,28024011-28024386
Length = 423
Score = 74.5 bits (175), Expect = 1e-13
Identities = 49/141 (34%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Frame = +3
Query: 240 HAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQI 419
H N G +VA++G PN GKSTLIN+I+ +K+ ++K TT + +C + QI
Sbjct: 119 HCANHRSG---YVAVLGKPNVGKSTLINQIVGQKLSIVTDKPQTTRHRILGICSEPEYQI 175
Query: 420 VFLDTPGVVTDREQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEML 599
+ DTPGV+ +++ + L M+ + ++ AD V VV DA CK + E + + + E +
Sbjct: 176 ILYDTPGVI---KKEMHKLDTMMMKNVRSAVGSADCVLVVVDA-CK-MPEKIDEILEEGV 230
Query: 600 -NSVQDMPSFLIINKVDKLVK 659
N ++P L++NK D L+K
Sbjct: 231 GNKDTELPVLLVLNKKD-LIK 250
>08_01_0709 +
6265949-6266452,6267697-6267786,6268257-6268402,
6268534-6268710,6268774-6268840,6268949-6269056,
6269718-6269732
Length = 368
Score = 58.8 bits (136), Expect = 5e-09
Identities = 31/92 (33%), Positives = 49/92 (53%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
V I+GAPN+GKS+L N ++ K+ A S K +TTT + + TQI F DTPG++
Sbjct: 151 VGIVGAPNAGKSSLTNTMVGTKVAAVSRKTNTTTHEILGVLTKGITQICFFDTPGLMLGH 210
Query: 456 EQKKYNLPPSMLGSCHKSLRCADVVGVVHDAS 551
+ + S S+ D++ V+ D +
Sbjct: 211 HGLPHRDVTVRVESAWSSINLYDLLIVLFDVN 242
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 47.6 bits (108), Expect = 1e-05
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Frame = +3
Query: 168 RGMCVF-SYRNMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKI 344
RG F S N PR P+ + + + V I+GAPN+GKSTL+ I K
Sbjct: 418 RGNAAFKSGTNKAPRIAEKGEKGPEMWIDLELKLVADVGIVGAPNAGKSTLLTAISAAKP 477
Query: 345 CAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDREQKKYNLPPSMLGSCHKSLRCAD 524
A+ T + + D +V D PG++ + + Y L L S RC+
Sbjct: 478 TIANYPFTTLLPNLGVVSLDFDATMVVADLPGLL-EGAHRGYGLGHEFL---RHSERCSV 533
Query: 525 VVGVVHDA--SCKYIRESLHKDVVEMLNSVQDMPSFLIINKVD 647
+V VV + +Y E++ ++ S+ D P ++ NK+D
Sbjct: 534 LVHVVDGSGEQPEYEFEAVRLELELFSPSLVDKPYIVVYNKMD 576
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/64 (34%), Positives = 42/64 (65%)
Frame = +3
Query: 264 KIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGV 443
+ V I+G PN GKS+LIN+++ R++C A+ + T +L + + + +D ++ LD+PG+
Sbjct: 399 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTREL-KWVRFGSDLEL--LDSPGI 455
Query: 444 VTDR 455
+ R
Sbjct: 456 LPMR 459
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 44.0 bits (99), Expect = 2e-04
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 3/131 (2%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
+ +AI+G PN GKSTL+N ++ + + T +R ++ + +DT G +
Sbjct: 312 LQLAIVGRPNVGKSTLLNTLLQEQRVLVGPEAGLTRDSIRTQFQFDNRTVYLVDTAGWME 371
Query: 450 DREQKKYNLPPSMLGSCHKSLRCADVVGVVHDAS--CKYIRESLHKDVVEMLNSVQDMPS 623
++K S++ S K+L A +V +V D K H +V+ ++++
Sbjct: 372 RSGKEKGPASLSVVQS-RKNLMRAHIVALVLDGEKIAKSKSSMNHPEVLIARQAIEEGRG 430
Query: 624 F-LIINKVDKL 653
+I+NK+D L
Sbjct: 431 LVVIVNKMDLL 441
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
VA+IG P+ GKSTL+ + AAS + T T + + Y NDT+I LD PG++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQY-NDTKIQLLDLPGIIEGA 123
Query: 456 EQKK 467
+ K
Sbjct: 124 SEGK 127
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/124 (22%), Positives = 57/124 (45%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
V+++G N+GKSTL+N++ + A T R + N T+ + DT G +
Sbjct: 256 VSLVGYTNAGKSTLLNRLTGADVLAEDKLFATLDPTTRRVLMKNGTEFLLTDTVGFIQKL 315
Query: 456 EQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLII 635
+ L +S +V + H + + I +++ K + E+ ++ +P ++
Sbjct: 316 PTMLVAAFRATLEEISESSVIVHLVDISHPLAQQQI-DAVDKVLKEL--DIESIPKLVVW 372
Query: 636 NKVD 647
NK+D
Sbjct: 373 NKID 376
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
VAIIG PN GKS L N+++ ++ T + Y D + + +DT GV+T
Sbjct: 163 VAIIGRPNVGKSALFNRLVGGNRAIVVDEPGVTRDRLYGRSYWGDREFMVIDTGGVIT 220
Score = 32.7 bits (71), Expect = 0.40
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQ-IVFLDTPGVVTD 452
+AI+G PN GKS+++N ++ S TT + D Q +DT G+
Sbjct: 376 IAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTRDAIDTEFTTEDGQKYKLIDTAGIRRR 435
Query: 453 REQKKYNLPPSMLG--SCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSF 626
L +++R +DVV +V +A I E +K + E + +
Sbjct: 436 AAVASAGSTTETLSVKRAFRAIRRSDVVALVVEAMA-CITEQDYK-IAERIEK-EGKACV 492
Query: 627 LIINKVDKL 653
+++NK D +
Sbjct: 493 IVVNKWDTI 501
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 39.1 bits (87), Expect = 0.005
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Frame = +3
Query: 69 KHIKFLLFKINYTPKWLFVIITIYHIITMATITRGMCVFSYRNMLPRRIVNYSFQPQHAE 248
KH+ FLL K + P W T + T++ + + N + S Q A
Sbjct: 254 KHLVFLLNKCDLVPAWA----TKGWLRTLSKDYPTLAFHASINSSFGKGSLLSVLRQFAR 309
Query: 249 NKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFL 428
K+ + + V +G PN GKS++IN + + +C KV + Y T+ +FL
Sbjct: 310 LKSDKQAISVGFVGYPNVGKSSVINTLRSKSVC----KVAPIPGETKVWQYITLTKRIFL 365
Query: 429 -DTPGVV 446
D PGVV
Sbjct: 366 IDCPGVV 372
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 37.1 bits (82), Expect = 0.019
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGV 443
+ VAIIG PN GKS+L+N + + TT +V A + I LDT G+
Sbjct: 306 LQVAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHGIPITLLDTAGI 363
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 35.5 bits (78), Expect = 0.057
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
V ++G P+ GKSTL+NK+ A+ + T T + + Y +I LD PG++
Sbjct: 78 VGLVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMY-KGAKIQLLDLPGIIEGA 136
Query: 456 EQKK 467
+ K
Sbjct: 137 KDGK 140
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 35.5 bits (78), Expect = 0.057
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCN-DTQIVFLDTPGVV 446
+ V I+G PN GKS+LIN + ++ V +T + R+M D ++ LD PGVV
Sbjct: 269 ITVGIVGLPNVGKSSLINSLKRSRVV----NVGSTPGVTRSMQEVQLDKKVKLLDCPGVV 324
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 34.3 bits (75), Expect = 0.13
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +3
Query: 267 IVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVV 446
I V ++G PN+GKSTL++ + + A T + ++ Y + + D PG++
Sbjct: 339 IADVGLVGMPNAGKSTLLSALSRARPEIADYAFTTLRPNIGSLTYEDYFSVKVADIPGLI 398
Query: 447 TDREQKKYNLPPSMLGSCHKSLRCA---DVVGVVHDASCKYIRESLHKDVVEMLNSVQDM 617
+ + L + L ++ A D+ ++ E L VVE+ + + +
Sbjct: 399 KGAHENR-GLGHAFLRHIERTKVLAYVLDLAATLNGRKGVPPWEQLRDLVVELEHYQEGL 457
Query: 618 ---PSFLIINKVDK 650
PS ++ NK+D+
Sbjct: 458 TKRPSLIVANKIDE 471
>07_01_0130 - 963856-965454
Length = 532
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 177 CVFSYRNMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKII-DRKIC 347
C+F R M I+N+ +P+ ++ + + IIG GKSTL+ + D ++C
Sbjct: 185 CMFG-RQMEMEHIINFLLRPEPPNTLSVDNLGVLPIIGPAKVGKSTLVKHVCGDERVC 241
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
+ ++G+PN GKS+L+ +I+ + TT ++ N + DTPG++T
Sbjct: 247 LCLVGSPNVGKSSLV-RILSSGKPEVCSYPFTTRGILMGHIVSNHERFQVTDTPGLLTRD 305
Query: 456 EQKKYNL 476
+ ++ N+
Sbjct: 306 DDERNNI 312
>01_06_0536 + 30068881-30070383
Length = 500
Score = 32.7 bits (71), Expect = 0.40
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 177 CVFSYRNMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKI 329
C+F R + RI+N+ +P H K I + IIG GKSTL+ +
Sbjct: 172 CMFG-RQIEQERIINFLLEPNHPSAKGINVL---PIIGPGRVGKSTLVEHV 218
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
+ + ++G GKS IN I D A + T ++ R ++ +DTPG++
Sbjct: 160 LRILLLGKTGVGKSATINSIFDEPKVATNALAPATERIRRIDGTIKGIRVTVIDTPGLLP 219
Query: 450 DREQKKYN 473
+++ N
Sbjct: 220 HYHRQRKN 227
>03_06_0179 -
32171712-32171780,32171861-32171920,32172096-32172166,
32172246-32172273,32172356-32172502,32172626-32172904,
32172949-32173011,32173137-32173247,32173605-32173658,
32173761-32173949,32174275-32174670
Length = 488
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 249 NKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNK 362
N I + I+G PN GKSTL N I+ R + +AS++
Sbjct: 54 NARISMSLRAGIVGLPNVGKSTLFNAIV-RNLPSASSE 90
>03_02_0267 +
6990674-6990890,6991692-6991761,6991824-6991913,
6992635-6992797,6992910-6993137
Length = 255
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +3
Query: 279 AIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
A++G N GKS+LIN +I RK A ++K T+ + +V D PG
Sbjct: 43 AVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTINHFLVNKSWYLV--DLPG 94
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 31.5 bits (68), Expect = 0.93
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Frame = +3
Query: 210 RIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVR 389
R + S + +H N ++V VA++G N+GKSTL++ + + + + T +R
Sbjct: 269 RAIQRSNRKRHG-NSFGQELVTVAVVGYTNAGKSTLVSALSETDLYSDDRLFATVDPRLR 327
Query: 390 AMC----YCNDTQIVFLDTPGVVTDREQKKYNLPPSMLGSCHKSLR---CADVVGVVHDA 548
++ Y N + L +++D +LP ++ + H +L AD++ V D+
Sbjct: 328 SVILPSGYLN-RFFIHLLRKALLSDTVGFISDLPVQLVEAFHATLEEVVEADMLVHVLDS 386
Query: 549 SCKYIRE--SLHKDVVEMLNSVQDMPSFLI--INKVD 647
S I E S V++ + QD + +I NK+D
Sbjct: 387 SAPNIEEHRSTVLQVLQQIGVSQDKINSMIEVWNKID 423
>07_01_0131 - 966178-966291,966432-967685
Length = 455
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 177 CVFSYRNMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLI 320
C+F+ R M I+N+ + + N+N G + IIG N GKSTLI
Sbjct: 135 CLFN-RQMEMEHIMNFLLKDNTSSNQNPGVL---PIIGPSNVGKSTLI 178
>01_06_0603 +
30530486-30530984,30531174-30531202,30531484-30531660,
30533662-30533745,30534059-30534277
Length = 335
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 195 NMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTT 374
N++ V S +P + + A++G N GKS+L+N ++ RK A ++K
Sbjct: 112 NVIAADFVKSSVRPDDCPRDGLPEF---ALVGRSNVGKSSLLNSLVRRKRLALTSKKPGK 168
Query: 375 TKLV 386
T+ +
Sbjct: 169 TQCI 172
>07_01_0075 - 558829-560859
Length = 676
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/122 (25%), Positives = 47/122 (38%)
Frame = +3
Query: 282 IIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDREQ 461
I G PN GKS+ +NK I R TT L + +DTPG++ DR
Sbjct: 173 ICGYPNVGKSSFMNK-ITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGIL-DRPF 230
Query: 462 KKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLIINK 641
+ N+ + LR A + + SC Y + + + P ++ NK
Sbjct: 231 EDRNIIEMCSITALAHLRAAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLVIVCNK 290
Query: 642 VD 647
D
Sbjct: 291 TD 292
>06_01_0668 - 4882174-4884204
Length = 676
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/122 (25%), Positives = 47/122 (38%)
Frame = +3
Query: 282 IIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDREQ 461
I G PN GKS+ +NK I R TT L + +DTPG++ DR
Sbjct: 173 ICGYPNVGKSSFMNK-ITRADVDVQPYAFTTKSLFVGHADYKYLRYQVIDTPGIL-DRPF 230
Query: 462 KKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLIINK 641
+ N+ + LR A + + SC Y + + + P ++ NK
Sbjct: 231 EDRNIIEMCSITALAHLRAAVLFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLVIVCNK 290
Query: 642 VD 647
D
Sbjct: 291 TD 292
>07_03_1552 -
27648193-27648307,27648384-27648431,27649140-27649234,
27649311-27649376,27649721-27649810,27650210-27650437,
27650572-27650605,27651106-27651611
Length = 393
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 102 YTPKWLFVIITIYHIITMATITRGMCVFSYRNMLPRRIVNYSFQPQHAENK 254
YT +W F+++TIY A G V+S +N L + ++ F EN+
Sbjct: 167 YT-QWTFLLVTIYFAFATAISAHGCWVYSKKN-LKKADESHEFLSDDVENR 215
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +3
Query: 273 HVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTD 452
+V ++G GKS IN I S + TT + + +DTPG+ T
Sbjct: 586 NVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPGLGTT 645
Query: 453 REQKKYNLPPSMLGSCHKSL-RC-ADVV 530
+K N +L S K + RC DVV
Sbjct: 646 HMDEKSN--RKVLNSVKKYIKRCPPDVV 671
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIID---RKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
V+I+G +SGKSTL+N++ R++ A + TT + A C + V +D G
Sbjct: 43 VSIMGPQSSGKSTLLNQLFGTNFREMDAFRGRSQTTKGIWIARCVGVEPCTVVMDLEG 100
>11_06_0706 +
26460400-26462254,26462499-26462562,26462929-26462981,
26464400-26464401,26464528-26464598,26464938-26465020,
26465065-26465126
Length = 729
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 264 KIVHVAIIGAPNSGKSTLINKII-DRKICAASNK 362
K+ +AI+G GK+TL KI DRKI + NK
Sbjct: 193 KLYKLAIVGTGGVGKTTLAQKIYNDRKIKGSFNK 226
>11_06_0697 + 26371193-26371397,26371562-26374254
Length = 965
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 264 KIVHVAIIGAPNSGKSTLINKII-DRKICAASNK 362
K+ +AI+G GK+TL KI DRKI + NK
Sbjct: 144 KLYKLAIVGTGGVGKTTLAQKIYNDRKIKGSFNK 177
>01_01_1085 - 8534269-8534356,8535408-8536042
Length = 240
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 177 CVFSYRNMLPRRIVNYSFQP--QHAENKNIGKIVHVAIIGAPNSGKSTLINKI-IDRKIC 347
C+F R M +IV++ +P A + N G + ++G P GK TL+ + ID +I
Sbjct: 106 CMFG-RQMEKEQIVDFLLRPACSSAGDPNPGVL---PVVGGPEVGKRTLVEHVCIDERIR 161
Query: 348 AASNKVH 368
K+H
Sbjct: 162 QYFAKIH 168
>11_04_0410 -
17347853-17347978,17348289-17348399,17348481-17348840,
17348913-17349105,17349239-17349279
Length = 276
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 269 RTCCDYWS-PKFRKKYFNKQNN 331
R C++WS PKFRKK N + N
Sbjct: 158 RLLCEHWSTPKFRKKSLNGKRN 179
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 246 ENKNIGKIVHVAIIGAPNSGKSTLINKIID 335
+N +GK++ V+I+G+ GK+TL + D
Sbjct: 189 DNLPLGKMIKVSIVGSGGMGKTTLSRAVYD 218
>09_02_0099 +
4265550-4265663,4266794-4267024,4267619-4267681,
4267774-4268223
Length = 285
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 200 HITITKNTHPTSNRSHGYYVIYSNNY 123
HI I NTH TSNR H + I+ +Y
Sbjct: 69 HIVIV-NTHSTSNRKHVDFPIFDGDY 93
>07_01_0129 -
959600-959625,960100-961428,961585-961657,962185-962226
Length = 489
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 177 CVFSYRNMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKIID 335
C+FS R + I+N+ + +N+G + IIG N GKSTLI D
Sbjct: 197 CLFS-RQLEREHIMNFLLKENTPGAENLGIL---PIIGPENVGKSTLIEHACD 245
>02_01_0301 +
2011707-2015423,2016982-2017182,2017670-2017786,
2018030-2018122
Length = 1375
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 213 IVNYSFQPQHAE--NKNIGKIVHVAIIGAPNSGKSTLINKI 329
I+N F P N NI +AI+GA +GK+TL+ I
Sbjct: 197 IINLLFDPAMVGGGNSNIKGYSSIAIVGAGGAGKTTLLQYI 237
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKI----------IDRKICAASNKVHTTTKLVRAMCYCNDTQIVF 425
V ++G PN GKS LIN I D+ A + T+ + + I
Sbjct: 139 VMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVGPLPGVTQDIAGYKISSQPSIYV 198
Query: 426 LDTPGVV 446
LDTPGV+
Sbjct: 199 LDTPGVL 205
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 267 IVHVAIIGAPNSGKSTLINKI 329
+ V ++G PN+GKSTL++ I
Sbjct: 276 VADVGLVGLPNAGKSTLLSAI 296
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,464,737
Number of Sequences: 37544
Number of extensions: 314189
Number of successful extensions: 919
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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