Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_G03
         (881 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         27   1.0  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    26   1.7  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    26   1.7  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       24   5.3  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       24   7.1  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.3  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.3  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.3  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 143 HNNHGYDYSWDVCF*LS*YAPSSYR 217
           H N+G    W++C  L+  APSS R
Sbjct: 156 HKNYGRQELWEICARLTHQAPSSDR 180


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
           subunit AgOn protein.
          Length = 134

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 264 KIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQ 416
           K + + ++GA  SGKST++ ++   KI   S       K  R + Y N  Q
Sbjct: 19  KDIKLLLLGAGESGKSTIVKQM---KIIHESGFTSEDFKQYRPVVYSNTIQ 66


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
           subunit AgOa protein.
          Length = 134

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 264 KIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQ 416
           K + + ++GA  SGKST++ ++   KI   S       K  R + Y N  Q
Sbjct: 19  KDIKLLLLGAGESGKSTIVKQM---KIIHESGFTSEDFKQYRPVVYSNTIQ 66


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 243 AENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQ 416
           A+ +     V + ++GA  SGKST++ ++   KI   +       +  R + Y N  Q
Sbjct: 24  ADGERAASEVKLLLLGAGESGKSTIVKQM---KIIHETGYSQEECEQYRPVVYSNTIQ 78


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 237 QHAENKNIGKIVH-VAIIGAPNSGKSTLINKI 329
           Q  ++K + +  H + ++GA  SGKST++ ++
Sbjct: 33  QLQKDKQVYRATHRLLLLGAGESGKSTIVKQM 64


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 123 VIITIYHIITMATITRGM 176
           +II IY+IIT+  I R +
Sbjct: 56  IIIAIYYIITLVAIMRAV 73


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = +3

Query: 321  NKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
            N +   K  +   + + T   + A+  C  T   FLD   V TD+
Sbjct: 1025 NAVSTTKSLSGGERSYATVAFLIALWSCVSTPFFFLDEYDVFTDQ 1069


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 432 YPEIQSVCHCSN 397
           YPEIQSV  C N
Sbjct: 876 YPEIQSVVQCIN 887


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,240
Number of Sequences: 2352
Number of extensions: 14526
Number of successful extensions: 41
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)