Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G03
(881 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g66470.1 68418.m08382 expressed protein 69 3e-12
At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to ... 65 7e-11
At5g39960.1 68418.m04846 GTP-binding family protein contains Pfa... 52 4e-07
At4g02790.1 68417.m00379 GTP-binding family protein contains Pfa... 44 1e-04
At1g72660.1 68414.m08403 developmentally regulated GTP-binding p... 44 2e-04
At1g17470.1 68414.m02143 developmentally regulated GTP-binding p... 44 2e-04
At5g57960.1 68418.m07252 GTP-binding family protein similar to S... 43 2e-04
At1g78010.1 68414.m09091 tRNA modification GTPase, putative simi... 43 2e-04
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 42 5e-04
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 42 7e-04
At4g39520.1 68417.m05588 GTP-binding protein, putative similar t... 37 0.021
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 37 0.021
At3g07050.1 68416.m00837 GTP-binding family protein contains Pfa... 37 0.021
At1g52980.1 68414.m05995 GTP-binding family protein contains Pfa... 37 0.021
At4g15810.1 68417.m02406 chloroplast outer membrane protein, put... 35 0.083
At3g05310.1 68416.m00579 GTP-binding protein-related low similar... 35 0.083
At1g10300.1 68414.m01160 GTP-binding protein-related contains si... 35 0.083
At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P... 34 0.14
At2g22870.1 68415.m02715 expressed protein 33 0.19
At1g80770.1 68414.m09476 expressed protein 33 0.25
At1g50920.1 68414.m05725 GTP-binding protein-related similar to ... 31 1.0
At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3... 31 1.3
At5g11480.1 68418.m01340 expressed protein 31 1.3
At1g56050.1 68414.m06436 GTP-binding protein-related similar to ... 31 1.3
At1g33930.1 68414.m04205 avirulence-responsive family protein / ... 31 1.3
At4g10620.1 68417.m01736 expressed protein 30 1.8
At1g03160.1 68414.m00293 GTP-binding protein-related contains TI... 30 2.4
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 29 4.1
At5g20300.1 68418.m02416 chloroplast outer membrane protein, put... 29 5.4
At4g13030.2 68417.m02034 expressed protein 29 5.4
At4g13030.1 68417.m02033 expressed protein 29 5.4
At1g70610.1 68414.m08135 ABC transporter (TAP1) contains Pfam pr... 29 5.4
At3g57180.1 68416.m06366 expressed protein 28 7.2
At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical ... 28 7.2
At2g41670.1 68415.m05148 GTP-binding family protein contains Pfa... 28 7.2
At5g13580.1 68418.m01570 ABC transporter family protein 28 9.5
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 28 9.5
At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identic... 28 9.5
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 28 9.5
At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly id... 28 9.5
At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical... 28 9.5
At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical... 28 9.5
At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical... 28 9.5
At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identic... 28 9.5
At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identic... 28 9.5
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 69.3 bits (162), Expect = 3e-12
Identities = 41/129 (31%), Positives = 71/129 (55%)
Frame = +3
Query: 273 HVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTD 452
+VA++G PN GKSTL N++I +KI ++K TT + +C + Q++ DTPGV+
Sbjct: 131 YVAVVGMPNVGKSTLSNQMIGQKISIVTDKPQTTRHRILGICSSPEYQMILYDTPGVI-- 188
Query: 453 REQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLI 632
E+K + L M+ + + AD V ++ DA CK ++ + + E L ++ P L+
Sbjct: 189 -EKKMHRLDTMMMKNVRDAAINADCVVILVDA-CK-TPTNIEEVLKEGLGDLEKKPPMLL 245
Query: 633 INKVDKLVK 659
+ L+K
Sbjct: 246 VMNKKDLIK 254
>At1g30960.1 68414.m03791 GTP-binding protein (ERG) identical to
GTP-binding protein ERG SP:O82653 from [Arabidopsis
thaliana]
Length = 437
Score = 64.9 bits (151), Expect = 7e-11
Identities = 35/94 (37%), Positives = 54/94 (57%)
Frame = +3
Query: 264 KIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGV 443
K ++V IIG PN+GKS+L N ++ K+ AAS K +TTT V + DTQ+ F DTPG+
Sbjct: 152 KSLNVGIIGPPNAGKSSLTNFMVGTKVAAASRKTNTTTHEVLGVLTKGDTQVCFFDTPGL 211
Query: 444 VTDREQKKYNLPPSMLGSCHKSLRCADVVGVVHD 545
+ + Y + + + S+ DV+ V+ D
Sbjct: 212 MLKKSGYGYKDIKARVQNAWTSVDLFDVLIVMFD 245
>At5g39960.1 68418.m04846 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 616
Score = 52.4 bits (120), Expect = 4e-07
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
+ +AI+G PN GKSTL+N +++ + + T VR + +DT G +
Sbjct: 313 LQLAIVGKPNVGKSTLLNALLEEERVLVGPEAGLTRDAVRVQFEFQGRTVYLVDTAGWLE 372
Query: 450 DREQKKYNLPPSMLGSCHKSLRCADVVGVVHDAS--CKYIRESLHKDVVEMLNSVQDMPS 623
E+ K S++ S KSL A V+ +V DA K H +VV +V++
Sbjct: 373 RTERDKGPASLSIMQS-RKSLMRAHVIALVLDAEEIIKAKCSMTHSEVVIARRAVEEGRG 431
Query: 624 F-LIINKVDKL 653
+I+NK+D+L
Sbjct: 432 LVVIVNKMDRL 442
>At4g02790.1 68417.m00379 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 372
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
V IIG PN GKS+LIN+++ RKICAA+ + T ++ + + D + LD+PG++
Sbjct: 214 VRAGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREM-KWVKLGKDLDL--LDSPGMLP 270
Query: 450 DR 455
R
Sbjct: 271 MR 272
>At1g72660.1 68414.m08403 developmentally regulated GTP-binding
protein, putative very strong similarity to
developmentally regulated GTP binding protein (DRG1)
[Arabidopsis thaliana] GI:2345150
Length = 399
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
VA+IG P+ GKSTL+ + AAS + TT + + + NDT+I LD PG++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEF-TTLTCIPGVIHYNDTKIQLLDLPGIIEGA 123
Query: 456 EQKK 467
+ K
Sbjct: 124 SEGK 127
>At1g17470.1 68414.m02143 developmentally regulated GTP-binding
protein (DRG1) identical to developmentally regulated
GTP binding protein (DRG1) [Arabidopsis thaliana]
GI:2345150
Length = 399
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
VA+IG P+ GKSTL+ + AAS + TT + + + NDT+I LD PG++
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEF-TTLTCIPGVIHYNDTKIQLLDLPGIIEGA 123
Query: 456 EQKK 467
+ K
Sbjct: 124 SEGK 127
>At5g57960.1 68418.m07252 GTP-binding family protein similar to
SP|P25519 GTP-binding protein hflX {Escherichia coli}
Length = 540
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/126 (24%), Positives = 58/126 (46%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
V+++G N+GKSTL+N++ + A + T R + N + + DT G +
Sbjct: 312 VSLVGYTNAGKSTLLNQLTGANVLAENRLFATLDPTTRRVQMQNGKEFLLTDTVGFIQKL 371
Query: 456 EQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLII 635
+ L +S VV + H + + I E++ K + E+ V +P ++
Sbjct: 372 PTTLVAAFRATLEEIAESSLLVHVVDISHPLAEQQI-EAVEKVMSEL--DVSSIPKLVVW 428
Query: 636 NKVDKL 653
NKVD++
Sbjct: 429 NKVDRV 434
>At1g78010.1 68414.m09091 tRNA modification GTPase, putative similar
to tRNA modification GTPase trmE [strain PCC 7120,
Anabaena sp.] SWISS-PROT:Q8YN91
Length = 560
Score = 43.2 bits (97), Expect = 2e-04
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGV-V 446
+ +AI+G PN GKS+L+N + + TT +V A I LDT G+
Sbjct: 318 LQIAIVGRPNVGKSSLLNAWSKSERAIVTEVAGTTRDVVEANVTVRGVPITLLDTAGIRE 377
Query: 447 TDREQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQ-DMPS 623
T+ +K + S + + ADV+ + A E ++ E+L +Q D P
Sbjct: 378 TNDIVEKIGVERS-----ETAAKVADVIIMAVSAV-----EGWTEEDTELLRKIQSDKPM 427
Query: 624 FLIINKVD 647
L++NK+D
Sbjct: 428 ILVMNKID 435
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 41.9 bits (94), Expect = 5e-04
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Frame = +3
Query: 168 RGMCVF-SYRNMLPRRIVNYSFQPQHAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKI 344
RG F S N +PR N P+ + + + V I+GAPN+GKSTL++ I +
Sbjct: 344 RGNASFKSGMNKVPRIAENGEEGPEMWLDLELKLVADVGIVGAPNAGKSTLLSVISAAQP 403
Query: 345 CAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDREQKKYNLPPSMLGSCHKSLRCAD 524
A+ T + + + D+ +V D PG++ + + + L L + RC+
Sbjct: 404 TIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLL-EGAHRGFGLGHEFL---RHTERCSA 459
Query: 525 VVGVVHDASCKYIR---ESLHKDVVEMLNSVQDMPSFLIINKVD 647
+V VV D S E++ ++ + + P + NK+D
Sbjct: 460 LVHVV-DGSAPQPELEFEAVRLELELFSPEIAEKPYVVAYNKMD 502
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
VAI+G PN GKS L N+++ ++ T + Y D + V +DT GV+T
Sbjct: 161 VAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQEFVVVDTGGVMT 218
Score = 31.5 bits (68), Expect = 0.77
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Frame = +3
Query: 246 ENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCND-TQIV 422
E + I +AIIG PN GKS+++N ++ S TT + A D +
Sbjct: 361 EEEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVSPVSGTTRDAIDAEFTGPDGEKFR 420
Query: 423 FLDTPGV--VTDREQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEM 596
+DT G+ + + +++R +DVV +V +A + L + E
Sbjct: 421 LIDTAGIRKKSSVASSGSTTEAMSVNRAFRAIRRSDVVALVIEAMACITEQDL--KIAER 478
Query: 597 LNSVQDMPSFLIINKVDKL 653
+ + +++NK D +
Sbjct: 479 IER-EGKGCLVVVNKWDTI 496
>At4g39520.1 68417.m05588 GTP-binding protein, putative similar to
SP|Q9Y295 Developmentally regulated GTP-binding protein
1 (DRG 1) {Homo sapiens}; contains Pfam profiles
PF02824: TGS domain, PF01018: GTP1/OBG family
Length = 369
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
V ++G P+ GKSTL+NK+ AS + T T + + Y +I LD PG++
Sbjct: 68 VGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITY-RGAKIQLLDLPGIIEGA 126
Query: 456 EQKK 467
+ K
Sbjct: 127 KDGK 130
>At4g02510.1 68417.m00343 chloroplast outer membrane protein, putative
similar to chloroplast protein import component Toc159
[Pisum sativum] GI:8489806, chloroplast outer envelope
protein 86 [Pisum sativum] GI:599958, GTP-binding protein
[Pisum sativum] GI:576509
Length = 1503
Score = 36.7 bits (81), Expect = 0.021
Identities = 22/82 (26%), Positives = 39/82 (47%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
+++ ++G GKS IN I+ +I + +TT + N +I F+DTPG+ +
Sbjct: 856 LNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKS 915
Query: 450 DREQKKYNLPPSMLGSCHKSLR 515
+ N ML S K ++
Sbjct: 916 AAMDQSTN--AKMLSSVKKVMK 935
>At3g07050.1 68416.m00837 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 582
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 240 HAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCN-DTQ 416
++ + + K + V IIG PN GKS+LIN + + V T L R++ + D
Sbjct: 244 YSRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVV----NVGATPGLTRSLQEVHLDKN 299
Query: 417 IVFLDTPGVV 446
+ LD PGVV
Sbjct: 300 VKLLDCPGVV 309
>At1g52980.1 68414.m05995 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 576
Score = 36.7 bits (81), Expect = 0.021
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 237 QHAENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQ 416
Q A K+ + + V +G PN GKS++IN + + +C KV + Y T+
Sbjct: 299 QFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVC----KVAPIPGETKVWQYITLTK 354
Query: 417 IVFL-DTPGVV 446
+FL D PGVV
Sbjct: 355 RIFLIDCPGVV 365
>At4g15810.1 68417.m02406 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 898
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVT 449
++V +IG GKS +N I A TT + QI LDTPG+++
Sbjct: 610 INVLVIGKTGVGKSATVNSIFGETKSAVGAFGVTTNSANYVVGNVGGIQISILDTPGLLS 669
Query: 450 DREQKKYN 473
++++N
Sbjct: 670 SATEEQFN 677
>At3g05310.1 68416.m00579 GTP-binding protein-related low similarity
to rac 1 protein [Physcomitrella patens] GI:7243743;
contains Pfam profile PF00036: EF hand (domain)
Length = 648
Score = 34.7 bits (76), Expect = 0.083
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Frame = +3
Query: 246 ENKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVF 425
E K+ K+V + G N+GKS L+N+ I R SN + +T +
Sbjct: 420 EKKSERKVVQCFVFGPKNAGKSALLNQFIGRSYDDDSNNNNGSTD--------EHYAVNM 471
Query: 426 LDTPGVVTDREQ----KKYNLPPSMLGSCHKSLRCADVVGVVHDASCKY 560
+ PGV++D ++ K+ + ++L DV ++D+S +Y
Sbjct: 472 VKEPGVISDTDKTLVLKEVRIKDDGFMLSKEALAACDVAIFIYDSSDEY 520
>At1g10300.1 68414.m01160 GTP-binding protein-related contains
similarity to nucleolar GTP-binding protein 1 SP: Q9BZE4
from [Homo sapiens];
Length = 687
Score = 34.7 bits (76), Expect = 0.083
Identities = 31/122 (25%), Positives = 50/122 (40%)
Frame = +3
Query: 282 IIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDREQ 461
I G PN GKS+ +NK + R A TT L + +DTPG++ DRE
Sbjct: 202 ICGCPNVGKSSFMNK-VTRADVAVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLL-DREI 259
Query: 462 KKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLIINK 641
+ N+ + +R A + + SC Y + + ++ P ++ NK
Sbjct: 260 EDRNIIELCSITALAHIRAAVLFFLDISGSCGYTIAQQASLFHNIKSVFKNKPLVIVCNK 319
Query: 642 VD 647
D
Sbjct: 320 TD 321
>At1g07620.1 68414.m00817 GTP1/OBG family protein similar to SP|P20964
Spo0B-associated GTP-binding protein {Bacillus subtilis};
contains Pfam profile PF01018: GTP1/OBG family
Length = 1016
Score = 33.9 bits (74), Expect = 0.14
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Frame = +3
Query: 267 IVHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVV 446
I V ++G PN+GKSTL+ + R + TT + +D + D PG++
Sbjct: 826 IADVGLVGMPNAGKSTLLG-ALSRAKPRVGHYAFTTLRPNLGNVNYDDFSMTVADIPGLI 884
Query: 447 TDREQKKYNLPPSMLGSCHKSLRCADVVGVVHDA-SCKYIR--ESLHKDVVEM---LNSV 608
Q + L + L ++ A VV + C+ + + L V+E+ +
Sbjct: 885 KGAHQNR-GLGHNFLRHIERTKVLAYVVDLASGLDGCEGLTPWQQLRDLVMELEFHEEGL 943
Query: 609 QDMPSFLIINKVDK 650
D S ++ NK+D+
Sbjct: 944 SDRSSLIVANKIDE 957
>At2g22870.1 68415.m02715 expressed protein
Length = 300
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
+AI+G N GKS+LIN ++ +K A ++K T+L+ IV D PG
Sbjct: 123 IAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLINHFLVNKSWYIV--DLPG 175
>At1g80770.1 68414.m09476 expressed protein
Length = 451
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
+ ++GAPN GKS+L+ +I+ N TT ++ N + DTPG++
Sbjct: 256 LCLVGAPNVGKSSLV-RILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLRRC 314
Query: 456 EQKKYNL 476
++ + NL
Sbjct: 315 DEDRNNL 321
>At1g50920.1 68414.m05725 GTP-binding protein-related similar to
GTP-binding protein SP:Q99ME9 from [Mus musculus]
Length = 671
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/124 (25%), Positives = 48/124 (38%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTDR 455
V I G PN GKS+ +NK + R TT L + +DTPG++ DR
Sbjct: 171 VLICGYPNVGKSSFMNK-VTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGIL-DR 228
Query: 456 EQKKYNLPPSMLGSCHKSLRCADVVGVVHDASCKYIRESLHKDVVEMLNSVQDMPSFLII 635
+ N+ + LR A + + SC Y + + + P ++
Sbjct: 229 PFEDRNIIEMCSITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKSLFMNKPLVIVC 288
Query: 636 NKVD 647
NK D
Sbjct: 289 NKTD 292
>At5g45160.1 68418.m05544 root hair defective 3 GTP-binding (RHD3)
family protein contains Pfam profile: PF05879 root hair
defective 3 GTP-binding protein (RHD3) family
Length = 834
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIID---RKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
VAI+G +SGKSTL+N + R++ A + + TT + A C + + +D G
Sbjct: 43 VAIMGPQSSGKSTLLNHLFKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEG 100
>At5g11480.1 68418.m01340 expressed protein
Length = 318
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 279 AIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
A++G N GKS+L+N ++ RK A ++K T+ + ND + +D PG
Sbjct: 139 ALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHF-RIND-KWYLVDLPG 190
>At1g56050.1 68414.m06436 GTP-binding protein-related similar to
GTP-binding protein GI:10176676 from [Bacillus
halodurans]
Length = 421
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 249 NKNIGKIVHVAIIGAPNSGKSTLINKIIDRKICAASN 359
+ + + I+G PN GKSTL N +++ A+N
Sbjct: 47 SSKVSMSLKAGIVGLPNVGKSTLFNAVVENGKAQAAN 83
>At1g33930.1 68414.m04205 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 336
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 267 IVHVAIIGAPNSGKSTLINKIIDRKICAAS-NKVHTTTKLVRAMCYCNDTQIV-FLDTPG 440
+ +V ++G +GKS N II RK+ + V TT+ D I+ +DTPG
Sbjct: 35 VKNVVLVGRTGNGKSATGNSIIGRKVFESKYQAVGVTTRCKTFRAVTPDGPIINVIDTPG 94
Query: 441 V 443
+
Sbjct: 95 L 95
>At4g10620.1 68417.m01736 expressed protein
Length = 597
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 261 GKIVHVAIIGAPNSGKSTLINKI 329
GK HV +G+ N+GKSTLIN +
Sbjct: 311 GKRGHVWAVGSQNAGKSTLINAV 333
>At1g03160.1 68414.m00293 GTP-binding protein-related contains
TIGRFAM TIGR00650: GTP-binding conserved hypothetical
protein domain; contains TIGRFAM TIGR00231: small
GTP-binding protein domain; similar to mitofusin 1
precursor (GI:12744896) [Homo sapiens]
Length = 642
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCY 401
+ I+G NSGKST+IN ++ ++ V TT + +CY
Sbjct: 352 MVIVGEFNSGKSTVINALLGKRY--LKEGVVPTTNEITFLCY 391
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPGVVTD 452
+A++G N+GKSTLI+ + + T +++ + ++ DT G ++D
Sbjct: 912 IAVVGYTNAGKSTLISALTKTALYCNERLFATLDPTLKSAHLPSGNFVLLSDTVGFISD 970
>At5g20300.1 68418.m02416 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 793
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = +3
Query: 270 VHVAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
+ + ++G GKS IN I + T ++ M + ++ F+DTPG
Sbjct: 167 LRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPG 223
>At4g13030.2 68417.m02034 expressed protein
Length = 479
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 255 NIGKIVHVAIIGAPNSGKSTLINKI 329
NI K + ++G +GKS+L+NKI
Sbjct: 100 NIPKTTSIMLVGPKGAGKSSLVNKI 124
>At4g13030.1 68417.m02033 expressed protein
Length = 481
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 255 NIGKIVHVAIIGAPNSGKSTLINKI 329
NI K + ++G +GKS+L+NKI
Sbjct: 102 NIPKTTSIMLVGPKGAGKSSLVNKI 126
>At1g70610.1 68414.m08135 ABC transporter (TAP1) contains Pfam
profile: PF00005 ABC transporters; similar to TAP1
protein (transporter of processed antigen) GB:AAD53033
(Oncorhynchus mykiss); identical to cDNA transporter
associated with antigen processing-like protein (TAP1)
GI:19335721
Length = 700
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +3
Query: 219 NYSFQPQHAENKNIGKIVH----VAIIGAPNSGKSTLINKII 332
+Y + + A +N+ VH VAI+G SGKSTL+N ++
Sbjct: 463 SYPSRDEVAVVQNVNISVHPGEVVAIVGLSGSGKSTLVNLLL 504
>At3g57180.1 68416.m06366 expressed protein
Length = 644
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 273 HVAIIGAPNSGKSTLINKI 329
+V +IGA N+GKSTLIN +
Sbjct: 378 NVWVIGAQNAGKSTLINAL 396
>At3g13870.1 68416.m01753 root hair defective 3 (RHD3) identical to
root hair defective 3 (RHD3) GI:1839188 from
[Arabidopsis thaliana] (Genes Dev (1997) 11(6), 799-811)
Length = 802
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIID---RKICAASNKVHTTTKLVRAMCYCNDTQIVFLDTPG 440
V+I+G +SGKSTL+N + R++ A + TT + A C + V +D G
Sbjct: 40 VSIMGPQSSGKSTLLNHLFGTNFREMDAFRGRSQTTKGIWIARCAGIEPCTVVMDLEG 97
>At2g41670.1 68415.m05148 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 386
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTK 380
V ++G PN GKS LIN I +I AA V K
Sbjct: 139 VMVVGVPNVGKSALINSI--HQIAAARFPVQERLK 171
>At5g13580.1 68418.m01570 ABC transporter family protein
Length = 727
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTT 374
+A++GA SGKSTLI+ + +R I S K + T
Sbjct: 122 LAVLGASGSGKSTLIDALANR-IAKGSLKGNVT 153
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +3
Query: 234 PQHAENKNIGKIVH----VAIIGAPNSGKST-LINKIIDRKICAASNKVHTTTKLVRAM 395
P +A + I K +H + +IG SGKST L+ + D + A+ + V T + + AM
Sbjct: 307 PIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
>At4g33650.1 68417.m04780 dynamin-like protein 2a (ADL2a) identical
to dynamin like protein 2a (ADL2a) [Arabidopsis
thaliana] GI:19032337; supported by cDNA gi:19032336
Length = 808
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLV 386
V ++G+ +SGKS+++ ++ R N + T LV
Sbjct: 62 VVVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLV 98
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = +3
Query: 234 PQHAENKNIGKIVH----VAIIGAPNSGKST-LINKIIDRKICAASNKVHTTTKLVRAM 395
P +A + I K +H + +IG SGKST L+ + D + A+ + V T + + AM
Sbjct: 304 PIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
>At3g60190.1 68416.m06724 dynamin-like protein E (DL1E) nearly
identical to dynamin-like protein E [Arabidopsis
thaliana] GI:19423872; contains Pfam profiles PF01031:
Dynamin central region, PF00350: Dynamin family,
PF02212: Dynamin GTPase effector domain
Length = 624
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLV 386
VA++G +SGKS+++ I+ R + + T LV
Sbjct: 43 VAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLV 79
>At2g44590.3 68415.m05551 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 612
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLV 386
VA++G +SGKS+++ I+ R + + T LV
Sbjct: 38 VAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLV 74
>At2g44590.2 68415.m05550 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 595
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLV 386
VA++G +SGKS+++ I+ R + + T LV
Sbjct: 38 VAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLV 74
>At2g44590.1 68415.m05549 dynamin-like protein D (DL1D) identical to
dynamin-like protein D [Arabidopsis thaliana]
GI:19569770; contains Pfam profiles PF01031: Dynamin
central region, PF00350: Dynamin family, PF02212:
Dynamin GTPase effector domain
Length = 596
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKLV 386
VA++G +SGKS+++ I+ R + + T LV
Sbjct: 38 VAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLV 74
>At2g14120.2 68415.m01573 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKL 383
VA++G+ +SGKS+++ ++ R N + T L
Sbjct: 46 VAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPL 81
>At2g14120.1 68415.m01572 dynamin-like protein 2b (ADL2b) identical
to dynamin like protein 2b (ADL2b) [Arabidopsis
thaliana] GI:19032339
Length = 780
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +3
Query: 276 VAIIGAPNSGKSTLINKIIDRKICAASNKVHTTTKL 383
VA++G+ +SGKS+++ ++ R N + T L
Sbjct: 46 VAVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPL 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,008,649
Number of Sequences: 28952
Number of extensions: 279396
Number of successful extensions: 808
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2077687200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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