Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G02
(821 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_8144| Best HMM Match : VWA (HMM E-Value=3.1e-16) 31 1.1
SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23) 31 1.5
SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 30 2.0
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 26 4.2
SB_33446| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-26) 29 4.6
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 29 4.6
SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_58666| Best HMM Match : Vps16_C (HMM E-Value=6.4e-37) 29 6.0
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 6.0
SB_14436| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_59353| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_42040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_25641| Best HMM Match : VWA (HMM E-Value=1.4e-37) 28 8.0
SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27) 28 8.0
>SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 530
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 529 NGNLYQSKESHSENSGTSTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNKG 708
NGN+ + +G STQ P ++Y +DG LY A S G ++ + TN G
Sbjct: 289 NGNVCGAMMDACNPTGNSTQCDGPPVLYAPSDG--PPVLY--APSDGPPLLYA---TNDG 341
Query: 709 PLVLYS 726
P VLY+
Sbjct: 342 PPVLYA 347
>SB_8144| Best HMM Match : VWA (HMM E-Value=3.1e-16)
Length = 193
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 367 DPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQ 546
DP + ++ K + + N+ ++ + GYT IDK ++ DK FT + G
Sbjct: 106 DPVIDAPFDKYKGVEMNAVNIKSDIDEQRRQKGYTFIDK--ALTLADKSLFTEEAGMRED 163
Query: 547 S-KESHSENSGTSTQDTVP 600
S K + S + G T+D P
Sbjct: 164 SLKVAVSMSDGIQTKDRGP 182
>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
Length = 553
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +1
Query: 382 SALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESH 561
+++N+ + +N I + NS + D D SI D + NDN ++Y + S
Sbjct: 289 NSINDNDNSINDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSIYDNDNSSIYDNDNSI 348
Query: 562 SENSGT 579
+N +
Sbjct: 349 YDNDNS 354
>SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 349 QRPEHRDPQDYSALNERKSQDKHTENLIPNLT-NSHKSYGYTGIDKDESIVSQDKVAFTN 525
++ E D ++E + +D+ T N P L N KSY I E ++ ++ + +
Sbjct: 28 RKREKSKGDDDGNVDENEPKDEETANQTPTLKDNDEKSYYKVDIPSSEQRITVEERSDDS 87
Query: 526 DNGNLYQSKESH 561
G+L KES+
Sbjct: 88 TRGHLGSPKESN 99
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +1
Query: 313 VPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDES 492
V D + V ++ E D L+ + SQ + + N H S+ G+D E+
Sbjct: 694 VKTDDQKVTGLQKKDEIGSELDNCELSSKSSQPESEQVRESKTHNEHVSHAPDGLDTQET 753
Query: 493 IVSQDKVAFTNDNGNLYQSKESHSENS 573
+ S+D+ + T KE +SE+S
Sbjct: 754 VGSKDEDSITERKKT--DQKEGNSESS 778
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 289 IIERRNHKVPHDLRNVE---NPSQRPEHRDPQDYSALNERKSQDKHTENLIP 435
+I+ HK P D +PS +H P DYS Q +T++++P
Sbjct: 891 LIDELTHKAPLDYSRAPRYGDPSINTQHMVPLDYSQAPRYCDQSMNTQHMVP 942
>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 29.5 bits (63), Expect = 3.4
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Frame = +1
Query: 337 ENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 516
E+ S H + + ++E+K ++K ENL+ KSY + ++ +S + +
Sbjct: 170 EDNSLNNSHSENDSKNRVSEKKYEEKTGENLVTETYQEQKSYQNSDYERQKSDRERTEAE 229
Query: 517 FTN-DNGNLYQSKESHSENS------GTSTQDTVPKIIYVQTDGLQDN 639
+ + N +SKE+ + +S ST + Y D + DN
Sbjct: 230 SSQITSRNTDESKETFAGSSRLPYDLSHSTAGSADLYAYACADPVDDN 277
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 544 QSKESHSENSGTSTQD 591
QS E H+EN G S QD
Sbjct: 8 QSTEKHTENEGNSNQD 23
Score = 21.8 bits (44), Expect(2) = 4.2
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 391 NERKSQDKHTEN 426
NE +S +KHTEN
Sbjct: 5 NEGQSTEKHTEN 16
>SB_33446| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-26)
Length = 291
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 64 MAWIVQLILACLFSLNVSCHFYRINNAARIPETPFI-NSDPVNYLQKL 204
M W+ ++AC F L V+ + Y + +T FI NS P+ +K+
Sbjct: 158 MLWLATALIACTFPLWVTSYSYLYIFKSAHAQTQFIVNSSPIEERRKI 205
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 283 DLIIERRNHKVPHDLRNVENPS-QRPEHRDP----QDYSALNERKSQDKHTENLIPNLTN 447
+++ E ++ KV +++E +R +H++ +D + ER+ +D EN+ N+ N
Sbjct: 954 EMVDEEQDRKVKDAEKDLEEVKLERRKHQEELETLKDKTLKVERELRDSQQENIKMNIEN 1013
Query: 448 SHKSYGYTGIDKDESIVSQDK 510
S S + ++ I +DK
Sbjct: 1014 SKLSRKVSSLESSVEIFEKDK 1034
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 29.1 bits (62), Expect = 4.6
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +1
Query: 301 RNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGID 480
R+H + H+LRN+ R P D++ + + + H S+ Y Y D
Sbjct: 409 RHHPLGHELRNIYE-------RSPLDWNPFDHARRRRYHR-------APSYYDYDYVS-D 453
Query: 481 KDESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQD 591
+ + V D+ + N N N Y+S + S+ S D
Sbjct: 454 ESDDWVPFDRNSRRNINNNNYESDDDDSDTDMVSDLD 490
>SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 544 QSKESHSENSGTSTQDTVPKIIYVQTDGLQDN 639
QS+ H E+SG ST+D++ ++ T G + N
Sbjct: 277 QSENGHGESSGASTEDSMQHVLQDVTHGSKVN 308
>SB_58666| Best HMM Match : Vps16_C (HMM E-Value=6.4e-37)
Length = 259
Score = 28.7 bits (61), Expect = 6.0
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 376 DYSALNERKSQDKH--TENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQS 549
D + ++ RKS +K E+ + L+++ +Y G + + ++++++ +D L
Sbjct: 50 DLANMSVRKSINKELDVESKMDCLSDAKMNYTKAG-NVIYTKITEEQMKLLDDQSRL--E 106
Query: 550 KESHSENSGTSTQDTVPKII 609
KE H E TS DT+ K I
Sbjct: 107 KEQHQEFKNTSLSDTIEKCI 126
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 PDLGDLIIERRNHKVPHDLRNVENPSQRPEHRDP--QDYSALNERKSQDKHTENLIPNLT 444
P LG +++ K R+ P + H+DP + + +E + + +LT
Sbjct: 187 PALGKRLMDLSKAKAQ---RSSSIPERLSTHQDPGVDEGKSRSETELNSARKNSSEVHLT 243
Query: 445 NSHKSYGYTGIDKDES 492
+ H+S TG+DK+E+
Sbjct: 244 DLHRSQSLTGLDKNEA 259
>SB_14436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 337 ENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTN 447
++ +Q P HR PQ+YS ++S+ + + P L N
Sbjct: 85 DSRNQHPNHRIPQNYSLRTIKRSEIRGSTGSPPTLAN 121
>SB_59353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 560
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 9 PLRSHYRESLRFDFFAVKHGVDSTVNL 89
P+ ++R SLR DF+ KH V S V +
Sbjct: 298 PISWYHRVSLRVDFYGCKHVVSSIVTV 324
>SB_42040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 265 NIPDLGDLIIERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNE---RKSQDKHTENLIP 435
N PD + + E N+K H + E+ + +P+H D + Y N+ R ++ H N
Sbjct: 192 NKPDNLNKMSEHLNNKPDHLNKMSEHLNNKPDHLDNKPYHLNNKPDHRNNKPDHLNNKPE 251
Query: 436 NLTN 447
+L N
Sbjct: 252 HLNN 255
>SB_25641| Best HMM Match : VWA (HMM E-Value=1.4e-37)
Length = 279
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 367 DPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQ 546
DP A ++ K + + N+ ++ + GYT IDK ++ DK FT + G
Sbjct: 137 DPVIDIAFDKYKGVEMNAVNIKRDIDELRRKKGYTFIDK--ALTLADKSLFTQEAGMRED 194
Query: 547 S-KESHSENSGTSTQDTVP 600
S K + + G T+D P
Sbjct: 195 SQKVAVLMSDGIQTKDRGP 213
>SB_9866| Best HMM Match : TP2 (HMM E-Value=0.27)
Length = 1019
Score = 28.3 bits (60), Expect = 8.0
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 20/163 (12%)
Frame = +1
Query: 295 ERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPN----LTNSHKSY 462
E RN E+ S R E R P S + ++++ HTE+ PN L +
Sbjct: 731 ESRNPHAESRNPRSESRSPRSESRIPYADSRITHNETRNAHTESHNPNIESRLPQNDPRN 790
Query: 463 GYTGIDKDESIVSQDKVAFTNDN-GNL-----YQSKESHSE-NSGTSTQD-------TVP 600
Y+ D + + + N++ G+L QSK+ E ++G S +D T P
Sbjct: 791 RYSESRNDSRYIPTESRSHPNESRGHLSESGSVQSKDKEKEVSTGASVEDAKRPVVRTNP 850
Query: 601 KIIYVQTDGLQDNQLYQVAGSSGDSI--IMSRAQTNKGPLVLY 723
K + + + D++L + + + SR + N+ LY
Sbjct: 851 KTLERRVESSDDDELKVIEEKTDEKSGNRQSRTEENRPSSPLY 893
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,444,090
Number of Sequences: 59808
Number of extensions: 498696
Number of successful extensions: 1285
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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