Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_G01
(923 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 3e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 9e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 39 0.001
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.011
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.014
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 34 0.025
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.025
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.075
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 32 0.099
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.53
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.9
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.9
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 5.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 6.5
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 6.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.7 bits (91), Expect = 3e-04
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXX 768
PPPPP P P PPPPP PPPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA--GPPPPPPPPPAVSAGG 789
Query: 769 XXXXXPXPPPPP 804
P P P
Sbjct: 790 SRYYAPAPQAEP 801
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +3
Query: 588 PPPPPPXXXXXXXXXXXXXXXXPPPPXGXXPPPP----XXGXXPPXPXXXPP 731
PPPPPP P P G PPPP G PP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Frame = +1
Query: 676 PPPPPXXGXXPXXPXXPPPPPXXP----PXPXXXXXXXXXPXPPPPPXXXP 816
PPPPP P P PP P P P PPPPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 654 PPPPXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXXXXPXXXXXXSPPPPP 803
PPPP P P P P P PP PPPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +1
Query: 676 PPPPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXXXXXXPPP 855
PPPPP P P P P PP P PPPP P PPP
Sbjct: 732 PPPPPPAVIVPTPA--PAPIPVPPPAPIMGG--------PPPPPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +1
Query: 727 PPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXXXXXXPPPXXXXXXXXXPPXXXPP 903
PPPP PP P P P P P P PPP PP PP
Sbjct: 732 PPPP--PPA-------VIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 549 PPPXXGGGGXXXXPPPPPP 605
PPP G G PPPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +3
Query: 441 PPPXRXXXXXXP-PXPPXXXXPGXGGXXXXXXXXXXXPPPXXGGGGXXXXPPPPP 602
PPP P P P P GG PPP G G PPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP------PPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +1
Query: 724 PPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXXXXXXPPPXXXXXXXXXPPXXXPP 903
PPPPP P P P P P P PPP PP PP
Sbjct: 732 PPPPPPAVIVPT--------PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 425 PXXXXPPPXPPXXXXXPPXXXLXXXPGXXGXXGXXXXXXXXPPPPXGGGGXXXXXPPPPP 604
P P P P PP + P PPPP G G PPPPP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPP--------------PPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +3
Query: 786 SPPPPPXXXXXXXPXXXXXXXPPXXXXXXXXXPPXXXP 899
SPPPPP P PP PP P
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 9e-04
Identities = 33/121 (27%), Positives = 34/121 (28%)
Frame = +3
Query: 552 PPXXGGGGXXXXPPPPPPXXXXXXXXXXXXXXXXPPPPXGXXPPPPXXGXXPPXPXXXPP 731
PP G PPPPPP P PP G PP PP P P
Sbjct: 325 PPIGNGSSNSSLPPPPPP-------PRSNAAGSIPLPPQGRSAPP------PPPPRSAPS 371
Query: 732 XPXXPPXXXXXPXXXXXXSPPPPPXXXXXXXPXXXXXXXPPXXXXXXXXXPPXXXPPXXX 911
PP +PP PP P PP PP PP
Sbjct: 372 TGRQPP---PLSSSRAVSNPPAPP----PAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Query: 912 P 914
P
Sbjct: 425 P 425
Score = 38.7 bits (86), Expect = 0.001
Identities = 35/157 (22%), Positives = 36/157 (22%), Gaps = 2/157 (1%)
Frame = +1
Query: 364 PPPPPXXGXXNXVXXXXXGAXRXXXXPPXXAXXXXXPPXXXPXXXPRGXGGAGXXXXXXX 543
PPPPP + G PP A P A
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 544 XXP--PPXGGGGXXXXXPPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXP 717
P PP G P P P PP PP P P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSA-----------PPSLPPSAPPSLPMGAPAAP 447
Query: 718 XXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXP 828
PP P PP P P P P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 35.5 bits (78), Expect = 0.011
Identities = 30/116 (25%), Positives = 30/116 (25%), Gaps = 8/116 (6%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPX----XGXXPXXP----XXPPPPPXX 744
PPPPP P PPPPP G P P PPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLP----PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 745 PPXPXXXXXXXXXPXPPPPPXXXPXXXPXXXXXXPPPXXXXXXXXXPPXXXPPXXP 912
P P P P PP PP PP P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLP 424
Score = 32.3 bits (70), Expect = 0.099
Identities = 31/134 (23%), Positives = 32/134 (23%), Gaps = 2/134 (1%)
Frame = +1
Query: 352 RXXRPPPPPXXGXXNXVXXXXXGAXRXXXXPPXXAXXXXXPPXXXPXXXPRGXGGAGXXX 531
R PPPPP + R PP A P P P G A
Sbjct: 358 RSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP--APPPAIPGRSAPALPP--LGNASRTS 413
Query: 532 XXXXXXPPPXGGGGXXXXXPPPPPXXXXXXXXXXXXXXXXX--PPPXXXXPPPPPXXGXX 705
PP P PP PP P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 706 PXXPXXPPPPPXXP 747
P P P P P P
Sbjct: 474 PAPPPAPAPAPAAP 487
Score = 31.1 bits (67), Expect = 0.23
Identities = 41/187 (21%), Positives = 41/187 (21%), Gaps = 3/187 (1%)
Frame = +1
Query: 361 RPPPPPXXGXXNXVXXXXXGAXRXXXXPPXXAXXXXXPPXXXPXXXPRGXGGAGXXXXXX 540
RPPPPP N PP PP P G
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPP--------PP---PPPRSNAAGSIPLPPQGR 358
Query: 541 XXXPPPXGGGGXXXXXPPPPPXXXXXXXXXXXXXXXXXPP--PXXXXPPPPPXXGXXPXX 714
PPP PPP PP P P PP
Sbjct: 359 SAPPPPPPRSAPSTGRQPPP-----LSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 715 PXXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXXXXXXPPPXXXXXXXXXPP-X 891
P PP PP P P P P P P PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 892 XXPPXXP 912
PP P
Sbjct: 474 PAPPPAP 480
Score = 28.3 bits (60), Expect = 1.6
Identities = 23/89 (25%), Positives = 23/89 (25%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXX 768
PP PP PP P PPP G P PP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPP----PIPPPSNGTVSSPPNSPP-RPIAPVSMNPAI 284
Query: 769 XXXXXPXPPPPPXXXPXXXPXXXXXXPPP 855
P PPP PPP
Sbjct: 285 NSTSKPPLPPPSSRVSAAALAANKKRPPP 313
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 38.7 bits (86), Expect = 0.001
Identities = 30/86 (34%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Frame = -1
Query: 911 GXXGGXXXG-GXXXXXXXXXGGGXXXXXXGXXXGXXXGGGGGXGXXXXXXXXXGXGGXXG 735
G GG G G GG G G G GGG G G GG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG--GFEGGPGGFGGGPG 245
Query: 734 GGGGXXGXXGXXPXXGGGGGXXXXGG 657
G GG G G P G GGG GG
Sbjct: 246 GFGGGLGGFGGGP-GGFGGGPGGHGG 270
Score = 35.1 bits (77), Expect = 0.014
Identities = 22/66 (33%), Positives = 22/66 (33%)
Frame = -1
Query: 851 GGXXXXXXGXXXGXXXGGGGGXGXXXXXXXXXGXGGXXGGGGGXXGXXGXXPXXGGGGGX 672
GG G G G GG G GG G GGG G G GGG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 671 XXXGGG 654
G G
Sbjct: 247 FGGGLG 252
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/70 (31%), Positives = 22/70 (31%), Gaps = 1/70 (1%)
Frame = -1
Query: 911 GXXGGXXXGGXXXXXXXXXGGGXXXXXXGXXXGXXXGGGGGXGXXXXXXXXXGXG-GXXG 735
G G GG G G G G G GGG G G G G G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Query: 734 GGGGXXGXXG 705
GG G G G
Sbjct: 263 GGPGGHGGPG 272
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 603 GGGGGXXXXXPPPPXGGGGXXXXXXXXPXXPXXPGXXXRXXXGGXXXXXGGXGGGXXXXG 424
GG GG PP P G GG G GG GG GGG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG--GGPGGFEGGPGGFGGGPGGFG 248
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = +1
Query: 676 PPPPPXXGXXPXX--PXXPPPPPXXPPXPXXXXXXXXXPXPPPPP 804
PP P P P PPPP PP P P PPPP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 34.3 bits (75), Expect = 0.025
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 658 PPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPP 801
PP P PPP P P PP P P P P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.9 bits (74), Expect = 0.033
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 655 PPPXXXXPPPPPXXGXXPXXPXXPPPPP 738
PPP PPPP P P PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 33.5 bits (73), Expect = 0.043
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 654 PPPPXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXXXXPXXXXXXSPPPPP 803
P P PP PP P PP P PP P S PPPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP------SAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 35.1 bits (77), Expect = 0.014
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 661 PXXXXPPPPPXXGXXPXXPXXPPPPP 738
P PPPPP G P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 34.7 bits (76), Expect = 0.019
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 658 PPXXXXPPPPPXXGXXPXXPXXPPPP 735
PP PPPPP P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 706 PXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPP 804
P P PPPPP P P PPPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQ--------PPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 724 PPPPPXXPPXPXXXXXXXXXPXPPPP 801
PP P PP P P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 733 PPXXPPXPXXXXXXXXXPXPPPPP 804
PP PP P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 548 PPPPXGGGGXXXXXPPPPP 604
PPPP G PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 548 PPPPXGGGGXXXXXPPPPP 604
PPPP G PPPPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 549 PPPXXGGGGXXXXPPPPPP 605
PPP G PPPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 784 PXPPPPPXXXPXXXPXXXXXXPPP 855
P PPPP P P PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 730 PPPXXPPXPXXXXXXXXXPXPPPPP 804
PP PP P PPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.3 bits (75), Expect = 0.025
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 2/83 (2%)
Frame = +1
Query: 661 PXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXXXX 840
P PP P P P PP P PP PP P P P
Sbjct: 124 PPSAPAPPTPQSELRP--PTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 841 XXPP--PXXXXXXXXXPPXXXPP 903
PP P PP PP
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPP 204
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +1
Query: 658 PPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXXX 837
PP PPP P P PP P PP P P P P P
Sbjct: 144 PPRPSIPPPSPASAP-PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK-- 200
Query: 838 XXXPPP 855
PPP
Sbjct: 201 -VPPPP 205
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXP 756
PPP P PPP P PP PP PP P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/77 (25%), Positives = 20/77 (25%), Gaps = 2/77 (2%)
Frame = +1
Query: 592 PPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPPPP--PXXPPXPXXX 765
PP P PP PP P P P PPP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIP---SKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 766 XXXXXXPXPPPPPXXXP 816
PP PP P
Sbjct: 187 APSLPSAVPPMPPKVPP 203
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.3 bits (75), Expect = 0.025
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +3
Query: 588 PPPPPPXXXXXXXXXXXXXXXXPPPPXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXXXXP 767
PP P P P P PP P PP P P PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 768 XXXXXXSPPPPP 803
PP P
Sbjct: 1219 VPTPSAGLPPVP 1230
Score = 32.7 bits (71), Expect = 0.075
Identities = 34/162 (20%), Positives = 34/162 (20%), Gaps = 4/162 (2%)
Frame = +3
Query: 441 PPPXRXXXXXXPPXPPXXXXPGXGGXXXXXXXXXXXPPPXXGGGGXXXXPP---PPPPXX 611
P P P P P P P G P PP P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 612 XXXXXXXXXXXXXXP-PPPXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXXXXPXXXXXXS 788
P P P G P P PP P P P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE 1196
Query: 789 PPPPPXXXXXXXPXXXXXXXPPXXXXXXXXXPPXXXPPXXXP 914
PP P P PP PP P P
Sbjct: 1197 APPVPKPSVGVPPVPPPSTAPP-VPTPSAGLPPVPVPTAKAP 1237
Score = 32.3 bits (70), Expect = 0.099
Identities = 30/131 (22%), Positives = 30/131 (22%), Gaps = 5/131 (3%)
Frame = +3
Query: 426 PXXXXPPPXRXXXXXXPPXP-----PXXXXPGXGGXXXXXXXXXXXPPPXXGGGGXXXXP 590
P PP PP P P P P P G P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG----VP 1189
Query: 591 PPPPPXXXXXXXXXXXXXXXXPPPPXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXXXXPX 770
P PPP PPP P P PP P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTA-PPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Query: 771 XXXXXSPPPPP 803
S P P
Sbjct: 1249 VSTPRSSVPSP 1259
Score = 32.3 bits (70), Expect = 0.099
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXX 768
P P P PPP P P P G P PPP PP P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV-----PPPSTAPPVPTPSA 1224
Query: 769 XXXXXPXP--PPPPXXXP 816
P P PP P
Sbjct: 1225 GLPPVPVPTAKAPPVPAP 1242
Score = 29.9 bits (64), Expect = 0.53
Identities = 26/106 (24%), Positives = 26/106 (24%), Gaps = 1/106 (0%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPP-PPPXXGXXPXXPXXPPPPPXXPPXPXXX 765
PP P P P PP P P G P P P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV----PKPAAGVPPVPPPS 1195
Query: 766 XXXXXXPXPPPPPXXXPXXXPXXXXXXPPPXXXXXXXXXPPXXXPP 903
P P P P P P P P PP
Sbjct: 1196 EAP---PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/83 (25%), Positives = 21/83 (25%), Gaps = 3/83 (3%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPP-PPPXXGXXPXXPXX--PPPPPXXPPXPX 759
P P P P P PP PPP P PP PP P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV 1219
Query: 760 XXXXXXXXPXPPPPPXXXPXXXP 828
P P P P P
Sbjct: 1220 PTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/70 (24%), Positives = 17/70 (24%)
Frame = +3
Query: 588 PPPPPPXXXXXXXXXXXXXXXXPPPPXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXXXXP 767
PP P P P P G P P PP P P P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Query: 768 XXXXXXSPPP 797
SP P
Sbjct: 1258 SPHSNASPSP 1267
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/75 (25%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Frame = +3
Query: 588 PPPPPPXXXXXXXXXXXXXXXXPPP---PXGXXPPPPXXGXXPPXPXXXPPXPXXPPXXX 758
PP P P PPP P P P PP P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 759 XXPXXXXXXSPPPPP 803
P + PP P
Sbjct: 1101 APPVPKPSVAVPPVP 1115
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/86 (24%), Positives = 21/86 (24%)
Frame = +1
Query: 655 PPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXX 834
P P PP P P P P PP P P P P P P
Sbjct: 1025 PLPSADAPPIP-----VPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 835 XXXXPPPXXXXXXXXXPPXXXPPXXP 912
P P P P P
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Score = 26.2 bits (55), Expect = 6.5
Identities = 24/110 (21%), Positives = 24/110 (21%), Gaps = 3/110 (2%)
Frame = +1
Query: 592 PPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPP-PPPXXPPXPXXXX 768
PP P P P PP P P P P PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSS 1071
Query: 769 XXXXXPXPP--PPPXXXPXXXPXXXXXXPPPXXXXXXXXXPPXXXPPXXP 912
P P PP P P PP P P
Sbjct: 1072 EIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/86 (23%), Positives = 20/86 (23%)
Frame = +1
Query: 655 PPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPPXXXPXXXPXX 834
PPP P P P PP P P P P P P P
Sbjct: 1063 PPPV---PAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 835 XXXXPPPXXXXXXXXXPPXXXPPXXP 912
P P P P P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKP 1145
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.075
Identities = 22/65 (33%), Positives = 22/65 (33%)
Frame = -1
Query: 854 GGGXXXXXXGXXXGXXXGGGGGXGXXXXXXXXXGXGGXXGGGGGXXGXXGXXPXXGGGGG 675
G G G G G GGG G G GG GG GG G G GG G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRG----GARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 674 XXXXG 660
G
Sbjct: 66 GAKGG 70
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = -1
Query: 815 GXXXGGGGGXGXXXXXXXXXGXGGXXGGGGGXXGXXGXXPXXGGGGGXXXXGGG 654
G G GG G G GG GG GG G G GG GG GG
Sbjct: 6 GSRGGRGGSRG--GRGGFNGGRGGFGGGRGGARG-GGRGGARGGRGGRGGARGG 56
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = -1
Query: 815 GXXXGGGGGXGXXXXXXXXXGXGGXXGGGGGXXGXXGXXPXXGGG-GGXXXXGGG 654
G G GG G G G GGG G G GG GG GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 32.3 bits (70), Expect = 0.099
Identities = 33/133 (24%), Positives = 33/133 (24%), Gaps = 12/133 (9%)
Frame = +3
Query: 441 PPPXRXXXXXXPPXPPXXXXPG---XGGXXXXXXXXXXXPPPXXGGGGXXXXPPP---PP 602
PPP P PP PG PPP G PPP P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 603 PXXXXXXXXXXXXXXXXPPPPXGXXP----PPPXXGXXPPXPXXXPPXPXXPPXXXXXPX 770
PPPP P PPP P PP P P
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Query: 771 XXXXXSP--PPPP 803
PPPP
Sbjct: 329 MHHEPGEHMPPPP 341
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/68 (25%), Positives = 17/68 (25%)
Frame = +1
Query: 589 PPPPPXXXXXXXXXXXXXXXXXPPPXXXXPPPPPXXGXXPXXPXXPPPPPXXPPXPXXXX 768
PPPPP P PP P PPPP P P
Sbjct: 192 PPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQST 251
Query: 769 XXXXXPXP 792
P P
Sbjct: 252 NTSQLPMP 259
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 658 PPXXXXPPPPPXXGXXPXXPXXPPPPPXXPP 750
PP PP PPPPP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Frame = +1
Query: 727 PPPPXXPPX---PXXXXXXXXXPXPPPPP 804
PPP PP P P PPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +1
Query: 655 PPPXXXXPPPPPXXGXXPXXPXXPPPPPXXP 747
PPP P P PPPPP P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 682 PPPXXGXXPXXPXXPPPPPXXPPXPXXXXXXXXXPXPPPPP 804
P P P P P P PP P P PP P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/58 (27%), Positives = 16/58 (27%), Gaps = 2/58 (3%)
Frame = +1
Query: 661 PXXXXPPPPPXXGXXPXXPXXPPPP--PXXPPXPXXXXXXXXXPXPPPPPXXXPXXXP 828
P P PP P P P PP P P P P P P P
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAP 641
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 697 GXXPXXPXXPPPPP 738
G P P PPPPP
Sbjct: 939 GVMPAFPPPPPPPP 952
Score = 20.6 bits (41), Expect(2) = 5.7
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 784 PXPPPPP 804
P PPPPP
Sbjct: 947 PPPPPPP 953
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 731 GGGXXGXXGXXPXXGGGGGXXXXGGG 654
GGG G G GG GG GGG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGG 471
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 766 GXXXXXGGXXGXGGXXXGXGGXXPXXGGGGXXPXGGG 656
G G G GG G GG GG GGG
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGG 165
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 815 GXXXGGGGGXGXXXXXXXXXGXGGXXGGGGGXXGXXGXXPXXGGGG 678
G GG GG G G G GGG G G GGGG
Sbjct: 137 GGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPG--GFANMFGGGG 180
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 749 GGXXGGGGGXXGXXGXXPXXGGGGGXXXXGGG 654
GG GGG G G GG G GGG
Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGG 167
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,192,041
Number of Sequences: 5004
Number of extensions: 48423
Number of successful extensions: 703
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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