Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F23
(908 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 5e-23
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 66 5e-11
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 60 3e-09
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 57 2e-08
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 9e-08
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 51 1e-06
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 50 2e-06
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 50 2e-06
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 50 3e-06
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 50 3e-06
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 48 8e-06
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 48 8e-06
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 48 1e-05
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 47 2e-05
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 46 6e-05
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 46 6e-05
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 46 6e-05
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 43 4e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 42 5e-04
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 42 7e-04
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 42 0.001
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 41 0.001
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 41 0.002
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 40 0.002
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 40 0.004
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.008
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.015
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 38 0.015
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 36 0.034
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 36 0.045
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.045
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 36 0.060
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.74
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 31 0.97
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 31 0.97
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 31 1.3
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 31 1.3
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 31 1.7
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 31 1.7
SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085) 31 1.7
SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_34095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 30 2.2
SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 29 5.2
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 29 5.2
SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) 29 6.9
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 105 bits (252), Expect = 5e-23
Identities = 47/65 (72%), Positives = 57/65 (87%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
LKVDNLTYRTT EDL++VF++ G++GDIYIPRDR T ESRGFAFVRF+E+RDAE+A+D M
Sbjct: 18 LKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAMDCM 77
Query: 393 DGRML 407
D L
Sbjct: 78 DATCL 82
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 403 CWTAGNFAFRWRDMVAPSSP 462
C A F FRWRDMV P P
Sbjct: 81 CLMAEKFVFRWRDMVVPRIP 100
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 66.5 bits (155), Expect = 3e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
S + V NL Y T DL +VFER G+V + I RD+ TRESRG AF+ F +R+ A+ A+
Sbjct: 10 STVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVA 69
Query: 387 TMDGRMLDGRELRVQMAR 440
++ + + GR ++ +A+
Sbjct: 70 AVNKKQMFGRTIKCTIAK 87
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 65.7 bits (153), Expect = 5e-11
Identities = 28/82 (34%), Positives = 48/82 (58%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
++V NL+ T DL+ +F G + I++ +D++T +S+GFAF+ F R DA A++ +
Sbjct: 183 IRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEVL 242
Query: 393 DGRMLDGRELRVQMARYGRPLI 458
G D L V+ A+Y P +
Sbjct: 243 SGFGYDHLILNVEWAKYVHPCL 264
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/74 (37%), Positives = 46/74 (62%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
+ NL ++ DL+ F R +V D+ + DR T+ RGFAFV F +++ E+A++ +DG
Sbjct: 234 IGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDG 292
Query: 399 RMLDGRELRVQMAR 440
+ DGR ++V AR
Sbjct: 293 QEFDGRSMKVNQAR 306
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 309 DRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMAR 440
DR T RGF FV F + ++A+D DG LDGR ++V A+
Sbjct: 43 DRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQ 86
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 59.7 bits (138), Expect = 3e-09
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
++L V +LT + ++ +F G V + +P DR SRGFA+V + + + E+AL
Sbjct: 1157 TKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
Query: 387 TMDGRMLDGRELRVQMARYGRP 452
MDG +DG+E+ VQ RP
Sbjct: 1217 HMDGGQIDGQEIAVQSVLPPRP 1238
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
R + NL+Y + L F C +V D+ + DR T RGF FV F + + E+A+D
Sbjct: 6 RCYIGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDE 64
Query: 390 MDGRMLDGRELRVQMAR 440
DG+ DGR ++V A+
Sbjct: 65 FDGQDFDGRPMKVNQAQ 81
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 54.8 bits (126), Expect = 9e-08
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
SR+ + N+ + ++ R FE G + D+++ R+ GFAF F +RRDAE+A+
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGPLRDVWVARN-----PPGFAFCVFEDRRDAEDAVR 56
Query: 387 TMDGRMLDGRELRVQMAR---YGRPLIAIQE 470
+DGR + G+ RV++A+ GRP A E
Sbjct: 57 ELDGRYICGQRARVELAKGPSRGRPRQASNE 87
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
S L V NL+Y TT + L FE C I+ DR + ESRGF FV + + A++ L
Sbjct: 289 SSLIVRNLSYDTTTDSLGAAFEGCSNAKVIF---DRESGESRGFGFVDYDDVETAKKVLS 345
Query: 387 TMDGRMLDGRELRVQMA 437
M G +DGR++R+ A
Sbjct: 346 EMAGAEVDGRQVRLDFA 362
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +3
Query: 237 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGR 401
R ED+R FE+ G + D+++ +D+ T+E+RG +V+F + A A + MDGR
Sbjct: 33 RHNAEDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMDGR 87
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L V L Y TT +++ F R GE+ + D TR SRGF FVRF + DA+ L T
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST- 175
Query: 393 DGRMLDGRELRVQMAR 440
+ GR V++ R
Sbjct: 176 -SHRIQGRLCEVRLPR 190
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 353
+L V L TT + L F + GEV D+YIP + R F FV F
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP-----KPFRHFGFVTF 242
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
+RL V +L + T ++ VFE G V + + D T S+G+ FV+F E A+ A++
Sbjct: 242 TRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAME 301
Query: 387 TMDGRMLDGRELRV 428
M+G L GR L++
Sbjct: 302 QMNGFELAGRPLKI 315
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/74 (28%), Positives = 39/74 (52%)
Frame = +3
Query: 246 PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 425
P DL F + G+V D+ I DR +R S+G A++ F ++ A+ + G+ L G +
Sbjct: 159 PRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAIG-LSGQKLLGAPIM 217
Query: 426 VQMARYGRPLIAIQ 467
V + + + +A +
Sbjct: 218 VMLTQAEKNRLAAE 231
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESR--GFAFVRFFERRDAEEA 380
SRL + NL + T L+ F GEV + +P+ + R +R GF FV+F DA +A
Sbjct: 247 SRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKA 306
Query: 381 LDTMDGRMLDGRELRVQMA 437
L+ M+ + + GR + V A
Sbjct: 307 LEEMNAKKILGRPVAVDWA 325
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD- 395
+ NL++ +T +++ +F++ G++ + D T+ S+G AFV++ + L D
Sbjct: 420 IRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDE 479
Query: 396 ---GRMLDGRELRVQMA 437
G LDG L+V +A
Sbjct: 480 DSEGLFLDGNRLQVDLA 496
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/88 (28%), Positives = 48/88 (54%)
Frame = +3
Query: 183 LRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFER 362
+R++ +++L V + Y + + LR+ F + GE+ + + +DR T++S+G+ FV
Sbjct: 2 IRNQDTKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVT-MAT 60
Query: 363 RDAEEALDTMDGRMLDGRELRVQMARYG 446
DA E M++GR+ V +A G
Sbjct: 61 SDAAELACKNKRPMIEGRQANVNLAYLG 88
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG--FAFVRFFERRDAEEAL 383
R+ V NL +DL +F + G + D+ D R G FAFV F + RDAE+A+
Sbjct: 262 RVYVGNLPQDVREKDLHDIFYKYGHIADV----DLKNRRGAGPPFAFVEFEDPRDAEDAV 317
Query: 384 DTMDGRMLDGRELRVQMARYG 446
DG DG +RV+ R G
Sbjct: 318 KGRDGHEFDGYRIRVEFPRGG 338
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 428
ED++++F G V + RDR T +S G+AFV + DA +A+ M+G L + L+V
Sbjct: 41 EDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKV 100
Query: 429 QMAR 440
AR
Sbjct: 101 SFAR 104
Score = 35.9 bits (79), Expect = 0.045
Identities = 20/82 (24%), Positives = 44/82 (53%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
+ L + L E++ +F+ G++ + +D + E RG FVRF +R +A+ A+D
Sbjct: 113 ANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTGFVRFDKRCEAQTAID 171
Query: 387 TMDGRMLDGRELRVQMARYGRP 452
++ + L G +++ + ++ P
Sbjct: 172 DLNNKTLPGTNVKLTV-KFANP 192
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 48.4 bits (110), Expect = 8e-06
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
++L V NL +L R FE+ G + +++ R+ GFAFV + + RDAEEA+
Sbjct: 4 TKLYVGNLGRNADSSELERAFEKFGRLSKVWVARN-----PPGFAFVEYEDYRDAEEAVR 58
Query: 387 TMDGRMLDGRELRVQMA 437
+DG + R +RV+ +
Sbjct: 59 ELDGANVCDRTIRVEFS 75
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/67 (35%), Positives = 36/67 (53%)
Frame = +3
Query: 240 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 419
TT EDL +F R G + + RD+ T ES +AF+ F + D E A MD ++D R
Sbjct: 131 TTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKMDNVLIDDRR 190
Query: 420 LRVQMAR 440
+ V ++
Sbjct: 191 IHVDFSQ 197
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 48.4 bits (110), Expect = 8e-06
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL- 383
++L V L TT E LR FE GE+ D+ + D T++SRGF +V F + + L
Sbjct: 14 AKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLK 73
Query: 384 DTMD--GRMLDGRELRVQMA 437
D ++ +DG+E+ V+ A
Sbjct: 74 DKVENGAHRIDGKEVEVKRA 93
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 48.0 bits (109), Expect = 1e-05
Identities = 26/74 (35%), Positives = 36/74 (48%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
V L + L F G++ D+ IP D T + RGF FV F D A+D M+
Sbjct: 9 VGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNE 68
Query: 399 RMLDGRELRVQMAR 440
L GR +RV +A+
Sbjct: 69 SELFGRTIRVNLAK 82
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
V N+ Y + E L+ +F G V + DR T + +G+ F + ++ A A+ ++G
Sbjct: 29 VGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 88
Query: 399 RMLDGRELRVQMA 437
L+GR LRV A
Sbjct: 89 YELNGRALRVDSA 101
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/91 (29%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
+++ + +L + ++ F G + D+++ R+ GFAF F +RRDAE+A+
Sbjct: 32 TKVYIGSLGDNASKREIENEFGYYGPLKDVWVARN-----PPGFAFCIFDDRRDAEDAVR 86
Query: 387 TMDGRMLDGRELRVQMAR---YGRPLIAIQE 470
+DGR + G+ +RV++A+ GRP + E
Sbjct: 87 ELDGRYICGQRVRVELAKGPSRGRPRMGSNE 117
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 45.6 bits (103), Expect = 6e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
+ NL + E LR +F CG V + + RDR T +GF +V FE +DA M+
Sbjct: 60 IGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYV-LFESKDAVVFALKMNN 118
Query: 399 RMLDGRELRV 428
GR++RV
Sbjct: 119 AEFKGRKIRV 128
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 45.6 bits (103), Expect = 6e-05
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
+L V L+Y TT E L+ F + GE+ + I D T RGFAFV+F + +A +A+D
Sbjct: 30 KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA-DAID 87
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 45.6 bits (103), Expect = 6e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 294 IYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMAR 440
+ I DR T RGF FV F + + E+A+D DG+ LDGR ++V A+
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAK 173
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCG-EVGDIYI---PRDRYTRE----SRGFAFVRFFER 362
+++ NL ++ T ++L+ VFE V D+ I PR+ + ++ SRGF FV F
Sbjct: 50 NKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANP 109
Query: 363 RDAEEALDTMDGRMLDGRELRV 428
DA+ A+ +++G+ + GR L++
Sbjct: 110 EDAQTAVKSLNGKEVQGRTLKI 131
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 395
EDLR FE G++ + I RD TRE++G+ +V+F + A AL+ D
Sbjct: 67 EDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCD 115
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 189 HESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRD 368
H W L V N+ +D+ +F GE+ ++++ DR T +G+A V + ++
Sbjct: 288 HPVEGWI-LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKE 346
Query: 369 AEEALDTMDGRMLDGRELRVQMA 437
A+ AL+ ++G + G+ + V A
Sbjct: 347 AQSALEALNGAEMLGQNISVDWA 369
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L V N+ Y E + +F +CG V + I D ++ +GF FV + +A+ A+ T+
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTL 336
Query: 393 DGRMLDGRELRVQMAR 440
+G M + L+ R
Sbjct: 337 NGFMYTNKPLQSSRIR 352
Score = 39.5 bits (88), Expect = 0.004
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L V+ + T + R +FE + + I R + + S GF FV + DA++A+D +
Sbjct: 49 LIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKL 108
Query: 393 DGRMLDGRELRVQMARYG 446
+G + + L+V +R G
Sbjct: 109 NGFTIGNKVLKVAFSRPG 126
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 42.7 bits (96), Expect = 4e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
R+ V ++ + E +R F G + I + D + +GFAFV + A+ AL+
Sbjct: 103 RVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLALEQ 162
Query: 390 MDGRMLDGRELRV 428
M+G +L GR ++V
Sbjct: 163 MNGVLLGGRNIKV 175
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 264 VFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 437
+F + G V ++++P+DR T+ +G+ FV F DA+ A+ M+ + G+ +RV A
Sbjct: 32 LFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKA 89
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 300 IPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 437
I RD T S+GFAF+ F ++ A++ M+G+ L R + V A
Sbjct: 132 IMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 41.9 bits (94), Expect = 7e-04
Identities = 24/70 (34%), Positives = 42/70 (60%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L V LT + + E LR+ FE+ GE+ + + RD T+ SRGF F+ F + + + L++
Sbjct: 111 LSVIPLT-QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS- 168
Query: 393 DGRMLDGREL 422
+ LDG+++
Sbjct: 169 GAQELDGKKM 178
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 41.5 bits (93), Expect = 0.001
Identities = 28/85 (32%), Positives = 44/85 (51%)
Frame = +3
Query: 201 AWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEA 380
A S + V NL Y+ + L+ F+ G V I D ++S+G V+F +A A
Sbjct: 183 AASTVFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDD-EKKSKGMGTVQFETPMEAMNA 241
Query: 381 LDTMDGRMLDGRELRVQMARYGRPL 455
++ + G+ML R LRV+M R P+
Sbjct: 242 VNLLHGKMLMDRALRVRMDRAAPPV 266
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 279 GEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV-QMARYGRP 452
GE+ ++ + RD+ T + +GF F+ + ++R A+D +G L GR +RV + Y RP
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDHCSNYRRP 61
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 252 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 425
++++ FE+ G V I + R + + S+G+AFV F A+ A DTM M+ GR L+
Sbjct: 113 EIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTMHNYMMFGRLLK 170
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 41.1 bits (92), Expect = 0.001
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
RL V NL E+++ +F++ GEV +++I +++ GF F+R R AE A
Sbjct: 54 RLFVGNLI-DCDEEEMKEMFKKYGEVAEVFINKEK------GFGFIRLDTRLHAEAAKAG 106
Query: 390 MDGRMLDGRELRVQMARYGRPL 455
+D GR LRV+ A + L
Sbjct: 107 LDMATRKGRTLRVRFATHAAAL 128
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 165 K*VTEDLR--HESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 338
K +T+D++ ++M S+ + L + + L++VF G+V + +PR ++ E +GF
Sbjct: 72 KQMTDDIKLVKKAMKLSQQLEEKLPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGF 131
Query: 339 AFVRFFERRDAEEAL 383
AF+ F ++ AE +
Sbjct: 132 AFIEFESKQQAEHVV 146
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
R+ ++NL+ R + +DL+ + C +VGD+ R+ G + F +RD + AL
Sbjct: 98 RMTIENLSSRVSWQDLK---DFCRQVGDVTYGDAHKQRQGEGV--IEFSCKRDLKRALKK 152
Query: 390 MDGRMLDGRELRV 428
+DG L+G+ +R+
Sbjct: 153 LDGEELNGKRIRL 165
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM-DGRMLDGRELR 425
++L + E+CGE+ + + D T ++GFAF F E+ A +A+ T+ D + GR L
Sbjct: 167 DELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITTLNDKDIRPGRRLA 226
Query: 426 VQMAR 440
+ +R
Sbjct: 227 ICKSR 231
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 39.5 bits (88), Expect = 0.004
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
S L + +L T DL + F+ G V + D+ T S+ F FV + A+ A+
Sbjct: 277 SNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 336
Query: 387 TMDGRMLDGRELRVQMAR 440
M+G + + L+VQ+ R
Sbjct: 337 HMNGFQIGAKRLKVQLKR 354
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
+L + NL + + ++ + FE G V + I RD+ + SRGF FV A++
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68
Query: 390 MDGRMLDGRELRVQMA 437
M+ + GR + V +A
Sbjct: 69 MNQSSVGGRNITVALA 84
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +3
Query: 186 RHESMAWSRLKVDNLTYRTTPEDL--RRVFERCGEVGDIYIPRDRYTRE--SRGFAFVRF 353
R E M K N+ + +D+ ++ E C E G I + E S+GF FV F
Sbjct: 97 RIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSF 156
Query: 354 FERRDAEEALDTMDGRMLDGREL 422
+AEEA++ ++G+ + GR L
Sbjct: 157 ETPEEAEEAVNVLNGKEIGGRRL 179
Score = 37.5 bits (83), Expect = 0.015
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L + NL E LR F G + + +D S+GF FV F +A +A+ M
Sbjct: 214 LYIKNLDDPIDDERLREEFSPYGTISSAKVMKDD-KGNSKGFGFVCFSSPEEATKAVTEM 272
Query: 393 DGRMLDGRELRVQMAR 440
+GR+L + L V +A+
Sbjct: 273 NGRILISKPLYVALAQ 288
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRML-DGRELR 425
++L VFE CG + D + D + ++GFAF F + +A+ A+ +D + + G+ L
Sbjct: 166 DELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKLDNKEIRPGKRLG 225
Query: 426 V 428
V
Sbjct: 226 V 226
Score = 35.9 bits (79), Expect = 0.045
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +3
Query: 225 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRM 404
NL+ T E L+ + + G V DR ++ + +AFV F ER A +A++ DG+
Sbjct: 335 NLSPSITEEKLKEEYSQYGAV-------DR-VKKLKDYAFVHFTERDHALKAIEETDGKE 386
Query: 405 LDGRELRVQMAR 440
+DG ++ +A+
Sbjct: 387 MDGLKIEASLAK 398
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 37.5 bits (83), Expect = 0.015
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 15/96 (15%)
Frame = +3
Query: 192 ESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDRYTRES------------- 329
+S RL V N+ +R DLR++F G + D+ I +R ++ +
Sbjct: 63 DSSGPKRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNERGSKHAVRFPTRPNPLNLR 122
Query: 330 -RGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 434
GF FV F +A +A + ++G ++DGR++ V +
Sbjct: 123 IEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSL 158
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 37.1 bits (82), Expect = 0.020
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 291 DIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 437
++ + +D +S+GF FV F R DA +A+ MD + G++++ A
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWA 589
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 36.3 bits (80), Expect = 0.034
Identities = 25/72 (34%), Positives = 36/72 (50%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L V N+ TT DL+ FER GEV D+ I + + +AFV+F E A +A M
Sbjct: 251 LFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQ---PGNNPYAFVQFAELSSAIQARRKM 307
Query: 393 DGRMLDGRELRV 428
D + ++V
Sbjct: 308 DREYVGRNRVKV 319
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 36.3 bits (80), Expect = 0.034
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 255 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 434
++ +F + G V + + SRGFAFV + +AE+ +GR ++G +RV
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRVAY 281
Query: 435 ARYGR 449
GR
Sbjct: 282 GSPGR 286
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 35.9 bits (79), Expect = 0.045
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 330 RGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMAR 440
RG+ FV F + RDAE+A+ ++GR L G + V+ ++
Sbjct: 722 RGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSK 758
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
V+NL+ RT+ +DL+ F + G+V Y D + ++ G V F + D A++ +D
Sbjct: 802 VENLSSRTSWQDLKDYFRKYGKV--TY--ADAH-KKRIGEGVVEFESKDDLNTAIEKLDD 856
Query: 399 RMLDGRELRVQMAR 440
L GR +RV R
Sbjct: 857 TELGGRRIRVYEIR 870
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 35.9 bits (79), Expect = 0.045
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 177 EDLRHESMAWSRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 350
EDL + + +L V +L + TT ++LR FE+CGE+ I + + R F R
Sbjct: 226 EDLMAKVIQSKKLMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIVFFR 283
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 350
L VDNL+ T D+ R F G+V ++I DR T +S+G V+
Sbjct: 321 LFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVK 366
Score = 29.5 bits (63), Expect = 3.9
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
V L T E L+ FE+ GEV + I R + SR + FV F + ++E L
Sbjct: 84 VGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEVL--KKS 140
Query: 399 RMLDGRELRVQMAR 440
+++G+ + V +R
Sbjct: 141 HVINGKTVDVGKSR 154
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 35.5 bits (78), Expect = 0.060
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
V N+ + L+ VF + G++ + R+ R + FV F +R A +A+D ++G
Sbjct: 6 VRNVPLPMSETQLKAVFTKYGQIEKV--------RKIRDYGFVYFAKRESAVQAIDGING 57
Query: 399 RMLDGRELRVQMA 437
+DG +L V +A
Sbjct: 58 AYIDGCKLEVSLA 70
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 34.3 bits (75), Expect = 0.14
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 330 RGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMAR 440
RG+AF+ + RD A DG+ +DGR + V + R
Sbjct: 47 RGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDVER 83
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 33.5 bits (73), Expect = 0.24
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 255 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 434
L + F+ G V + D+ T S+ F FV + A+ A+ M+G + + L+VQ+
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 337
Query: 435 AR 440
R
Sbjct: 338 KR 339
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.1 bits (72), Expect = 0.32
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 392
L V NL + +DLR FE+ G V D+ I R + +AFV+F + A +A M
Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPA-RGQGNTYAFVKFADLDVAAKAKCAM 297
Query: 393 DGRMLDGRELRVQMAR 440
G+ + +++ R
Sbjct: 298 QGQCIGRNHIKIGYGR 313
>SB_1631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 32.3 bits (70), Expect = 0.56
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +1
Query: 325 KVEDSPS*GFSSVVTLKKPWTRWTDECWTAGNFAFRWRDMVAPSSPYRSRCDRGAQVQVS 504
+V D+PS VV K+ RW N+ R R V+P+ + CD V V+
Sbjct: 180 EVYDTPSKQMDDVVETKRLIFRWNRGA--KSNYTMRGRAGVSPTHAHVKECDADTFVTVT 237
Query: 505 FPPS 516
F P+
Sbjct: 238 FRPT 241
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 428
+ ++ + GE+ + +D T S+G+AF + + + A+ ++G L ++L V
Sbjct: 687 DQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQLGDKKLIV 746
Query: 429 QMARYG 446
Q A G
Sbjct: 747 QRASVG 752
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 279 GEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 431
G + ++ IP D+ T + R F FV F A + +DG L R + V+
Sbjct: 481 GPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINVK 531
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +3
Query: 291 DIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGR----MLDGRELRVQMARYGRP 452
DI + +D+ T SRGF FV +A + L+ + M+DGR + AR P
Sbjct: 438 DIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGRVITTLYARKSEP 495
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 31.5 bits (68), Expect = 0.97
Identities = 14/49 (28%), Positives = 30/49 (61%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 395
++L VFE G + ++ + D + ++RG+AFV + + DA+ + T++
Sbjct: 88 DELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKTLN 135
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 31.5 bits (68), Expect = 0.97
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = +3
Query: 252 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 431
DLR V E + I SRGF FV + D E+ DG +GR L+V
Sbjct: 57 DLRLVKEVSLSILARVIMEREQPERSRGFGFVTLENQEDLEDVTRKFDGFEYEGRRLKVA 116
Query: 432 MA 437
A
Sbjct: 117 EA 118
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 210 RLKVDNL-TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
R+ + NL T + +DL +F R G+V + + F FV+F + A+EA+
Sbjct: 47 RIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHAN--------FGFVQFETEKGADEAVA 98
Query: 387 TMDGRMLDGRELRVQM 434
GR+++G+++ V++
Sbjct: 99 KEHGRIINGKKIDVRI 114
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
R+ +L T E L R F + I RD+ + +S+G+ FV F + D +A+
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMRE 277
Query: 390 MD 395
M+
Sbjct: 278 MN 279
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 219 VDNLTYRTTPEDLRR----VFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
+ NL + E+L++ +F + G + DI + T + RG AFV F + A AL
Sbjct: 11 IKNLNEKIKKEELKKSLYAIFSQFGPILDIVALK---TLKMRGQAFVVFKDIGSATNALR 67
Query: 387 TMDGRMLDGRELRVQMAR 440
+M G + +R+Q A+
Sbjct: 68 SMQGFPFYDKPMRIQYAK 85
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 267 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 383
F GE+ +YIP + T+E +G V F +A E +
Sbjct: 141 FSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVV 179
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 279 GEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 398
GE+ ++ + RD+ T + +GF F+ + ++R A+D +G
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNG 42
>SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085)
Length = 292
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +3
Query: 336 FAFVRFFERRDAEEALDTMDGR-MLDGRELRVQMARYGRP 452
+AFV+F+ + A A + ++G+ ++DG L+VQ A +P
Sbjct: 80 YAFVKFYSAKAALRAKEEVNGKWLIDGNILKVQFASRKKP 119
>SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 210 RLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 389
RL V+NL+ R +DL+ + GEV +DR G F D AL
Sbjct: 344 RLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRV-----GEGVCDFSNESDMLYALKK 398
Query: 390 MDGRMLDGRELRV 428
+DG L G+ +R+
Sbjct: 399 LDGTELFGKRIRL 411
>SB_34095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 30.3 bits (65), Expect = 2.2
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +1
Query: 235 TERRLKTYAAFSKGAEKLVISTFPEIGTQGKVEDSPS*GFSSVVTLKKPWTRWTDECWTA 414
T R L+++ F+ + V G +V + G S T K+ +WT EC TA
Sbjct: 105 TVRNLRSFLGFASYYRRFVPKFAQIAGPLHQVVAAMGSGGSKRSTRKQISEKWTPECQTA 164
Query: 415 GNFAFRWRDMVAPSSPYRSRCDRG 486
+ R AP P R D+G
Sbjct: 165 FD-TLRTLLTAAPGVPQRIHSDQG 187
>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
Length = 1338
Score = 30.3 bits (65), Expect = 2.2
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 503 ETWTCAPRSQRLLYGDEGATISRHLNAKFPAVQHSSVHRVQGFFSVTT-LEKPHEGESST 327
ETW A R + Y ++ HL A V S+ H S TT + +P + ++
Sbjct: 127 ETWKTATRKKTSCYSTLATEMASHLQATSSPVVISNGHNASANISKTTKITQPTTQKKTS 186
Query: 326 FPC 318
PC
Sbjct: 187 QPC 189
>SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 222 DNLTYRTTPEDLRRVFERCGEVGDI-YIPRDR 314
D T E+L +FE CG+V D ++P+DR
Sbjct: 154 DKTRESVTEEELTSMFEDCGDVADFRFLPKDR 185
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.9 bits (64), Expect = 3.0
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 243 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGREL 422
T E L+ F G V + ++R S+GF V F A++A+D M+G + +
Sbjct: 120 TEEILKEEFNHLGHVERVNFEKNR----SQGF--VTFDTWEAADKAIDEMNGLKVQHVHI 173
Query: 423 RVQMAR 440
RV MAR
Sbjct: 174 RVSMAR 179
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.9 bits (64), Expect = 3.0
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +3
Query: 207 SRLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 386
++L V L+ T DL VF G++ + D T + F+ + + RDAEEA+
Sbjct: 6 TQLFVGRLSKETKLRDLENVFYLYGKL----LRCDLKT----AYGFIEYEDPRDAEEAMR 57
Query: 387 TMDGRMLDGRELRVQMARYG 446
+ R L G + V+ R G
Sbjct: 58 RENNRKLFGSRIVVEYVRSG 77
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 249 EDLRRVFERCGEVGDIYIPRDRYTRESRG--FAFVRFFERRDAEEALDTM 392
+DLR +FE G++ ++ I +D+YT + + FV + EE L M
Sbjct: 184 KDLRPIFEPYGQIYELTILKDKYTGQHKDDRKLFVGMISKHAKEEDLRVM 233
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 213 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 326
L V L+ TT DLR VFE+ G V I I D +E
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQAKE 220
>SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)
Length = 325
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 271 KGAEKLVISTFPEIGTQGKVEDSPS*GFSSVVTLKKPWTR-WTDECWTAGNFAFRWRD 441
K A +++ P I G + P+ + + K P R WT G F ++WR+
Sbjct: 4 KLAFAVLLCVIPHISGHGYLSIPPARNYCGALKDKGPCVRNWTPNELNCGGFVYQWRE 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,425,640
Number of Sequences: 59808
Number of extensions: 375741
Number of successful extensions: 1065
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2621784220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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