Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F22
         (921 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    33   1.9  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    33   1.9  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    33   1.9  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   5.9  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   5.9  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +2

Query: 608 GXKKFXXPPPVGPXXXIKIXGXPXPPPXXGAXXXGXVXXXXXPPXPP 748
           G K    PPP  P     + G P PPP  G    G       P  PP
Sbjct: 311 GPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPP 357


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +2

Query: 608 GXKKFXXPPPVGPXXXIKIXGXPXPPPXXGAXXXGXVXXXXXPPXPP 748
           G K    PPP  P     + G P PPP  G    G       P  PP
Sbjct: 311 GPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPP 357


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 16/47 (34%), Positives = 17/47 (36%)
 Frame = +2

Query: 608 GXKKFXXPPPVGPXXXIKIXGXPXPPPXXGAXXXGXVXXXXXPPXPP 748
           G K    PPP  P     + G P PPP  G    G       P  PP
Sbjct: 311 GPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPP 357


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +2

Query: 629 PPPVGPXXXIKIXGXPXPPPXXGAXXXGXVXXXXXPPXPP 748
           PPP  P     + G P PPP  G    G       P  PP
Sbjct: 446 PPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPP 485


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/40 (35%), Positives = 15/40 (37%)
 Frame = +2

Query: 629 PPPVGPXXXIKIXGXPXPPPXXGAXXXGXVXXXXXPPXPP 748
           PPP  P     + G P PPP  G    G       P  PP
Sbjct: 317 PPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPPSSPSFPP 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,734,751
Number of Sequences: 237096
Number of extensions: 1420105
Number of successful extensions: 2174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2025
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)