Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F20
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 33 0.040
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 33 0.053
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 31 0.21
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 30 0.37
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 29 0.86
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.86
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 29 1.1
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po... 28 1.5
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 2.0
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 28 2.0
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 28 2.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.6
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 3.5
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 27 3.5
SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein s... 27 4.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 4.6
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 6.1
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 26 6.1
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 26 6.1
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 26 8.1
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 26 8.1
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 33.5 bits (73), Expect = 0.040
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = +2
Query: 293 NLEKDG-PGKKPTEKQESAQAELSNPKLTQTDNSKAE-VPKTEAPKTEALKPEA-PIPEA 463
+L K+ P K+PTE Q + Q L + + T+T + + E +P + + L+ E+ P ++
Sbjct: 738 HLRKESIPSKQPTEGQHARQESLPSQQTTETKHLRKESIPSKQPSGGQQLRQESLPSQQS 797
Query: 464 CKSEAPKSEESKIETRGS 517
+S+ + +E + S
Sbjct: 798 SESKQSTQHQQPVEVQKS 815
Score = 31.9 bits (69), Expect = 0.12
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Frame = +2
Query: 293 NLEKDG-PGKKPTEKQESAQAELSNPKLTQTDNSKAE-VPKTEAPKTEALKPEAPIPEAC 466
+L K+ P K+PTE Q + Q L + + T+T + + E +P + + + + E+ +P
Sbjct: 706 HLRKESTPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQPTEGQHARQES-LP--- 761
Query: 467 KSEAPKSEESKIETRGSKPESAADKPQXXXXXXXXXXXXXXRKKTRSRKPKFT--AVETD 640
+ +++ + E+ SK S Q ++ T+ ++P ++++D
Sbjct: 762 SQQTTETKHLRKESIPSKQPSGGQ--QLRQESLPSQQSSESKQSTQHQQPVEVQKSIQSD 819
Query: 641 IKYSKAPSSEPAIPGPSQSKPITSTASQPIQYVQNNQRSKLP 766
+ KA P Q+KP S ASQ + + Q + P
Sbjct: 820 VSAPKAKEVSEK-PVSHQAKP--SNASQLSRNTDDTQAKEAP 858
Score = 29.1 bits (62), Expect = 0.86
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +2
Query: 311 PGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSE 490
P K+PTE Q + Q L + + T+T + + E ++ P + +P +E
Sbjct: 681 PSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQHTRQESLPSQQTTETKHLR 740
Query: 491 ESKIETR 511
+ I ++
Sbjct: 741 KESIPSK 747
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 33.1 bits (72), Expect = 0.053
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 293 NLEKDGPGKK---PTEKQESAQAELSNPKLTQTDNSKAEVPK-TEAPKTEALKPEAPIPE 460
N KD K+ P E++ + ++S + + D AEV + E K+ +KPE I E
Sbjct: 24 NETKDETSKRKHDPAEEESAVSTKVSKSEPLE-DKGNAEVKEFKETTKSNGVKPEVEITE 82
Query: 461 ACKSEAPKSEESKIETRGSKPE 526
+ K + + E I T G E
Sbjct: 83 STKIQKESNTEPCISTGGKVEE 104
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 299 EKDGPGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPE 460
E+D G E +E + ELS L+ ++S P T +T A E+ IP+
Sbjct: 234 EEDEEGSADEEDEEDSDVELSESSLSDDEDSPLRCPSTPV-QTAAAPNESQIPD 286
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.3 bits (65), Expect = 0.37
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 7/142 (4%)
Frame = +2
Query: 299 EKDGPGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPI-----PEA 463
++D P P +KQE+A+ N +++ + S E P+ A +A + P
Sbjct: 379 KQDSPSTVPVDKQETAKP--INKQVSSNETSAQEEPRESVAALRARFAKANVSENNDPPT 436
Query: 464 CKSEAPK--SEESKIETRGSKPESAADKPQXXXXXXXXXXXXXXRKKTRSRKPKFTAVET 637
A K S SK T +KP + P PK E
Sbjct: 437 FPKTAAKISSFNSKAGTSFAKPRPFTNNPNPISAPEKPTSGESLSLNPPPAMPK-VFPER 495
Query: 638 DIKYSKAPSSEPAIPGPSQSKP 703
DI + +++P++ PS +P
Sbjct: 496 DISSASQKAAQPSVITPSVPQP 517
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 29.1 bits (62), Expect = 0.86
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +2
Query: 299 EKDGPG-KKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPE-ACKS 472
EK G ++ + + E++N + + SK E PK E +PE PE + S
Sbjct: 203 EKSGTEVEQQSAPNSNGNEEVNNLEPVGQNESKQEPPKEENSNVSQEQPEQAQPEVSAAS 262
Query: 473 EAPKSEESKIETR 511
E P+S + E++
Sbjct: 263 EQPESNPTTTESQ 275
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.86
Identities = 37/142 (26%), Positives = 48/142 (33%), Gaps = 2/142 (1%)
Frame = +2
Query: 311 PGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSE 490
P +P K A LS P T A VP PK + P P+P A +AP
Sbjct: 982 PTSEPP-KDHPPSAPLSKPVSTSPAAPLARVPPV--PKLSSKAPPVPLPSA---DAPPIP 1035
Query: 491 ESKIETRGSKPESAADKPQXXXXXXXXXXXXXXRKKTRSRKPKFTAVETDIKYSKAPSSE 670
P S P+ S P A ++I APS
Sbjct: 1036 VPSTAPPVPIPTSTPPVPKSSSGAP-------------SAPPPVPAPSSEIPSIPAPSGA 1082
Query: 671 PAIPGPSQSKPI--TSTASQPI 730
P +P PS P+ S A+ P+
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPV 1104
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/84 (23%), Positives = 35/84 (41%)
Frame = +2
Query: 290 VNLEKDGPGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACK 469
V E K ++K + + +N + DN+ A + PE P+ +A K
Sbjct: 474 VKAESKVRSKAKSDKSRAKLSSDTNKDSEKNDNNDASLQSAGVASDGESSPETPLTKASK 533
Query: 470 SEAPKSEESKIETRGSKPESAADK 541
S+ K++ SK+ SK + K
Sbjct: 534 SK--KAKASKLANDTSKNANGETK 555
>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 590 RKKTRSRKPKFTAVETDIKYSKAP--SSEPAIPGPSQSKPITSTASQPIQ 733
R + +R P A E YS AP S E + P S KP S QP+Q
Sbjct: 301 RDREENRSP---AYEGSKSYSAAPEASMESSAPTESYDKPAASEEQQPLQ 347
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/68 (25%), Positives = 25/68 (36%)
Frame = +2
Query: 296 LEKDGPGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSE 475
LEK +++E Q LS +K V +AP KP P+
Sbjct: 414 LEKASTHGSFAKQKEGEQTSLSEKTALSEPENKTPVFSFKAPSATTDKPSPPVSSIFSFN 473
Query: 476 APKSEESK 499
AP + +K
Sbjct: 474 APSAASTK 481
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 27.9 bits (59), Expect = 2.0
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 VNLEKDGPGKKPTEKQESAQAE-LSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEAC 466
++L ++ +KP++ +E+ +++ LS Q+ + E+P T +T AP P
Sbjct: 573 ISLSEETKQEKPSKLKETVESKRLSTGVQKQSPAASKEIPVTSGSQT-----TAPKPSPW 627
Query: 467 KSEAPKSEESKIET 508
KS PK S ET
Sbjct: 628 KSLPPKHLPSLDET 641
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 290 VNLEKDGPGKKPTEKQESAQAELSNPKLTQTDNSKAEVP-KTEAPKTEALKPEAPIPEAC 466
++L+ P + TE+Q+ + + L T +++ E P + L+ +P+P
Sbjct: 4 ISLDYSSPSLQQTEEQDRELNFIDSSMLRPTPPQESDNRLAVEKPNIQPLQGHSPVPSFM 63
Query: 467 KSEAPKSEESKIETRGSKPESAAD 538
+ + SKI ++ E D
Sbjct: 64 STASTNISSSKINNNQTEFEQLRD 87
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 401 VPKTEAPKTEALKPEAPIPEA-CKSEAPKSEESKIET 508
VP+ P L P P+PE C E+P S+E+ ET
Sbjct: 130 VPEEPLPGEPPL-PNEPVPETNCHKESPLSDETVSET 165
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 3.5
Identities = 29/149 (19%), Positives = 55/149 (36%)
Frame = +2
Query: 317 KKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEES 496
K ++K+ + PK+ Q +N K V K ++PK E L + P + ++ +++
Sbjct: 84 KDSSKKEPVVVPKKGTPKIFQ-ENHK--VKKVKSPKKEKLVGKNPAEKEDTTDVEDTQKL 140
Query: 497 KIETRGSKPESAADKPQXXXXXXXXXXXXXXRKKTRSRKPKFTAVETDIKYSKAPSSEPA 676
+ + + P S K + F V + Y K S+EP
Sbjct: 141 E-QKHSTTPSSLKMKSSISLAAITADDSLHNSFSSNDIDDGFQTVTSSRSYGKKKSTEPL 199
Query: 677 IPGPSQSKPITSTASQPIQYVQNNQRSKL 763
Q++ A + + QR +L
Sbjct: 200 TKRQRQNQQKKLRAKEMQELADEEQRRRL 228
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 3.5
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +2
Query: 299 EKDGPGKKPTEKQESAQA-ELSNP-KLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKS 472
E+ P K+P K + A ++ P K DN + E T+ PK E E P+ S
Sbjct: 443 EEQKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEETVTQ-PKREKTPVEKSFPKPASS 501
Query: 473 --------EAPKSEESKIETRGSKPESA 532
+ SEE K+E P++A
Sbjct: 502 PVTFSEDVKKEPSEEKKLEVSDEAPKAA 529
>SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein
subunit L40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 279
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 401 VPKTEAPKTEALKPEAPIP----EACKSEAPKSEESKIETRGSKPESAADKP 544
+P+ P T LK + P+P + KS+ + + + +KPE KP
Sbjct: 8 IPRLRGPGTNVLKMKKPLPLHMRTKIREHLNKSDPTVKDDKSAKPELPFGKP 59
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 4.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 662 SSEPAIPGPSQSKPITSTASQPIQYVQNNQRSKLPLQLLFCTRYQIKYCP 811
SSEP+I S + T++ S P+ + S+LP F + +Y P
Sbjct: 81 SSEPSIFSESATPSETNSYSSPVSSYSDPATSQLPSSTSFFSPTSSEYTP 130
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 614 PKFTAVETDIKYSKAPSSEPAIPGPSQSKPITSTASQP 727
P T+VE I S SS+P S ++++SQP
Sbjct: 150 PSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQP 187
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 317 KKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPI 454
K+PTE SA + K +N+K + TE K +L+ + +
Sbjct: 231 KQPTEHPVSANVPAKSEKAVCDENTKISLTNTEHYKFHSLRGDVEV 276
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 26.2 bits (55), Expect = 6.1
Identities = 24/123 (19%), Positives = 54/123 (43%), Gaps = 2/123 (1%)
Frame = +2
Query: 317 KKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPI-PEACK-SEAPKSE 490
K P + + +N + + + + AE P+TEA ++ + + + ++ K +EAP S
Sbjct: 302 KAPQQTTQQGTQNSANAEPSSSASVPAEAPETEAEQSIDVSSDIGLRSDSSKPNEAPTSS 361
Query: 491 ESKIETRGSKPESAADKPQXXXXXXXXXXXXXXRKKTRSRKPKFTAVETDIKYSKAPSSE 670
E+ + +PE++ + ++ + + VE + + + PSS
Sbjct: 362 EN---IKADQPENSTKQENPEEDMQIKDAEEHSNLESTPAAQQTSEVEAN-NHQEKPSSL 417
Query: 671 PAI 679
PA+
Sbjct: 418 PAV 420
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 6.1
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +2
Query: 311 PGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTE--APKTEALKPEAPIPEACKSEAPK 484
P +KP + ++ PK S KTE P TE +P P E+
Sbjct: 82 PPEKPKKAHGKGKSS-KRPKAVDRRRSITAPSKTEPSTPSTEKPEPSTPSGESDHGSNAG 140
Query: 485 SEESKIETRGSKPESAADKPQ 547
+E + KPES + + +
Sbjct: 141 NESLPLLEEDHKPESLSKEQE 161
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 25.8 bits (54), Expect = 8.1
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
Frame = +2
Query: 329 EKQESAQAELSNPKL--------TQTDN-SKAEVPKTEAPKTEALKPEAPIPEACKSEAP 481
E+ ES ++E+ PK +++D+ S E +TE+ + + E+ +SE+
Sbjct: 58 EESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEEDSEVSDESESESESESESE 117
Query: 482 K---SEESKIETRGSKPESAADKPQ 547
+ SEE E+ S P S KP+
Sbjct: 118 EESESEEESDESERSGPSSFLKKPE 142
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 644 KYSKAPSSEPAIPGPSQSKPITSTASQPIQYVQNNQRSKLPLQ 772
++S + +S+P S S PI T SQ ++ NQ+S L Q
Sbjct: 254 QFSVSSASDPPQTPISMSPPIPPTPSQFSAFMYQNQQSYLSPQ 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,438,626
Number of Sequences: 5004
Number of extensions: 38432
Number of successful extensions: 181
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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