Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F20
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.3  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    26   1.3  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    25   2.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   4.0  
AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450 pr...    23   9.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +2

Query: 311 PGKKP--TEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPK 484
           P K P    + E+  +E S  + T    + A+ P+T  P  + L  E P+ +     AP 
Sbjct: 600 PSKIPGLARRPENISSE-SRSRSTSKQRANAKTPET--PSDQPLIKEVPMNKIQVGGAPS 656

Query: 485 SEESKIETRGSKPESAADKP 544
                ++++    E+A+ KP
Sbjct: 657 PNLKVVKSKIGSLENASHKP 676


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/52 (21%), Positives = 27/52 (51%)
 Frame = +2

Query: 317 KKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKS 472
           K+  ++  +A+   +  +  ++   +++ PK +  K    KPEA + E C++
Sbjct: 129 KEARKRDNNARQRSAQRETPKSSGGQSKQPKKKKKKRSLPKPEAVVIEKCEN 180



 Score = 25.0 bits (52), Expect = 3.0
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = +2

Query: 302 KDGPGKKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAP-IPEACKSEA 478
           +DG   +  E  ES   E+S  K      S  E+    A  +E L  +AP +P+  K   
Sbjct: 69  RDGMIAQMIEFMESMIKEMSELKKQLKQKSTQEIEVQTAQPSE-LAEDAPFVPQTRKGRV 127

Query: 479 PKSEESKIETRGSKPESAADKPQ 547
           PK E  K +    +  +  + P+
Sbjct: 128 PK-EARKRDNNARQRSAQRETPK 149


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 317 KKPTEKQESAQAELSNPKLTQTDNSKAEVPKTEAPKTEA 433
           K+P  K E        PK T  D+ +    K+ A KT A
Sbjct: 105 KEPKAKAERQSTLRKRPKFTVIDSGRKSFRKSTAAKTAA 143


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 14/69 (20%), Positives = 28/69 (40%)
 Frame = +2

Query: 341 SAQAELSNPKLTQTDNSKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRGSK 520
           ++  E+S P+L     S  E+P    P    +   A +P   + ++  S    + T  ++
Sbjct: 81  ASATEISLPELVTRSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAASSSCSLSTLETQ 140

Query: 521 PESAADKPQ 547
             +A    Q
Sbjct: 141 TATAGASVQ 149


>AY028782-1|AAK32956.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 419 PKTEALKPEAPIPEACKSEAPKS 487
           P  E   P+   PEAC+S  P S
Sbjct: 411 PDPERYDPDRFAPEACESRKPYS 433


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,996
Number of Sequences: 2352
Number of extensions: 8822
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)