Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F19
(853 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 120 6e-26
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 108 2e-22
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 101 2e-20
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 97 7e-19
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 95 2e-18
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 91 2e-17
UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellul... 89 2e-16
UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces cere... 87 7e-16
UniRef50_Q1DQB3 Cluster: Predicted protein; n=4; Pezizomycotina|... 84 4e-15
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 79 1e-13
UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7; Methan... 71 5e-11
UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5; T... 69 1e-10
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 68 3e-10
UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellul... 65 2e-09
UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11; Therm... 62 2e-08
UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2; Archae... 60 5e-08
UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n... 60 7e-08
UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1; Encepha... 60 7e-08
UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12; Archa... 54 3e-06
UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10; Archa... 54 5e-06
UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lambli... 52 2e-05
UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8; Euryar... 50 6e-05
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 50 1e-04
UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3; Haloba... 48 4e-04
UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3; ... 45 0.002
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;... 39 0.14
UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1; ... 39 0.18
UniRef50_P95911 Cluster: Orf c01013 protein; n=1; Sulfolobus sol... 36 1.7
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 35 2.3
UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3; ... 33 9.1
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 120 bits (288), Expect = 6e-26
Identities = 49/56 (87%), Positives = 53/56 (94%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MG A +WYSHPR+YGQGSR CR+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 108 bits (260), Expect = 2e-22
Identities = 44/56 (78%), Positives = 51/56 (91%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 101 bits (243), Expect = 2e-20
Identities = 40/56 (71%), Positives = 48/56 (85%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MG N+W+SHPR++G GSRSCR C+ HGLIRKYGL++CR+CFRE A DIGFKKLD
Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 96.7 bits (230), Expect = 7e-19
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
MGH +++SHP+++GQGSRSCR SNRHG IRKYGLN CRQCF +YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPQKFGQGSRSCRVYSNRHGRIRKYGLNKCRQCFHQYAKDIGFIKLD 56
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 95.1 bits (226), Expect = 2e-18
Identities = 38/54 (70%), Positives = 43/54 (79%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
MGH+N+W SHP++YG GSR CR C N HGLIRKYGLN CRQCFR A +IGF K
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 91.5 bits (217), Expect = 2e-17
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 288
M H ++WYS PR++G+GSR CR C++R GLIRKYG++ICRQCFRE A DIGF K+
Sbjct: 1 MTHESVWYSRPRKFGKGSRECRVCAHRAGLIRKYGMDICRQCFREKAQDIGFYKV 55
>UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellular
organisms|Rep: 40S ribosomal protein S29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 56
Score = 88.6 bits (210), Expect = 2e-16
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
M H N+W+SHPR+YG+GSR C R GLIRKYGLNI RQ FREYA+DIGF K
Sbjct: 1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVK 54
>UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces
cerevisiae YLR388w YS29A ribosomal protein S29; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P41057
Saccharomyces cerevisiae YLR388w YS29A ribosomal protein
S29 - Yarrowia lipolytica (Candida lipolytica)
Length = 78
Score = 86.6 bits (205), Expect = 7e-16
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
M H NIW+SHPR YG+G R CR +N++ +IRKYGLN+CRQ FRE A DIGF K
Sbjct: 23 MAHENIWFSHPRHYGKGGRKCRITNNQNAVIRKYGLNLCRQSFREKAADIGFTK 76
>UniRef50_Q1DQB3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 123
Score = 84.2 bits (199), Expect = 4e-15
Identities = 34/54 (62%), Positives = 43/54 (79%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
M H +++YS PR YG+GSR CR C+++ GLIRKYGL +CRQCFRE + DIGF K
Sbjct: 1 MTHESVFYSRPRNYGKGSRQCRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVK 54
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 79.4 bits (187), Expect = 1e-13
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +1
Query: 187 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
R+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 55
>UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7;
Methanococcales|Rep: 30S ribosomal protein S14P -
Methanococcus jannaschii
Length = 53
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/46 (65%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +1
Query: 157 RRYGQGSRSCRSCSN-RHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
++YG G R C+ C + GLIRKYGLN+CRQCFRE AH +GFKKLD
Sbjct: 8 KKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD 53
>UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5;
Trypanosomatidae|Rep: Ribosomal protein s29, putative -
Leishmania major
Length = 57
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 124 MGHANIWYSHPR-RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 288
MGH + W S + G+G+R C CSN+ LIRKY LN+CRQCFRE A IGF KL
Sbjct: 1 MGHLDQWRSRQKIGMGKGARCCVICSNQKALIRKYELNVCRQCFRENAEHIGFTKL 56
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 67.7 bits (158), Expect = 3e-10
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +1
Query: 187 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
R CSNRHGLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 85 RVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 117
>UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 239
Score = 67.3 bits (157), Expect = 5e-10
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 139 IWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 288
+W +HPR YG+ S+ CR C R GLI KY + CR+CFRE A IGF K+
Sbjct: 5 LWRTHPRNYGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKV 54
>UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellular
organisms|Rep: 30S ribosomal protein S14P -
Archaeoglobus fulgidus
Length = 51
Score = 64.9 bits (151), Expect = 2e-09
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +1
Query: 163 YGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
+G+G+ CR C R GLIR YGL +CRQCFRE A ++GFKK
Sbjct: 9 FGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKK 49
>UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11;
Thermoprotei|Rep: 30S ribosomal protein S14P -
Sulfolobus acidocaldarius
Length = 54
Score = 61.7 bits (143), Expect = 2e-08
Identities = 23/43 (53%), Positives = 34/43 (79%)
Frame = +1
Query: 157 RRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
RR+G+G + C+ C +R +I+KYGL +CRQCFRE A+ +GF+K
Sbjct: 10 RRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRK 52
>UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2;
Archaea|Rep: 30S ribosomal protein S14P - Nanoarchaeum
equitans
Length = 69
Score = 60.5 bits (140), Expect = 5e-08
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +1
Query: 157 RRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
R++G+G+R C C G+IR+YGL +C+ CF+E AH++GF K
Sbjct: 24 RKFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFK 66
>UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n=1;
Ostreococcus tauri|Rep: RS29_CULQU 40S ribosomal protein
S29 - Ostreococcus tauri
Length = 157
Score = 60.1 bits (139), Expect = 7e-08
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 178 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
R R C N+ +IRKY LNICRQCFREYA DIGF+K
Sbjct: 120 RRSRVCENQWAIIRKYNLNICRQCFREYAKDIGFQK 155
Score = 36.3 bits (80), Expect = 0.98
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSR 180
MGH+++W SHP YG+GSR
Sbjct: 23 MGHSDVWASHPANYGKGSR 41
>UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S29
- Encephalitozoon cuniculi
Length = 55
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +1
Query: 145 YSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
+SH + +G+GSRSC SC G+IRK L +CR+CFREYA DIGF D
Sbjct: 9 HSHRKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIYD 55
>UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12;
Archaea|Rep: 30S ribosomal protein S14P - Thermoplasma
volcanium
Length = 53
Score = 54.4 bits (125), Expect = 3e-06
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +1
Query: 157 RRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
++YG C C + G++RKYGL++CRQCFRE A +GF+K
Sbjct: 10 KKYGHID-GCVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEK 51
>UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10;
Archaea|Rep: 30S ribosomal protein S14P - Pyrococcus
abyssi
Length = 56
Score = 54.0 bits (124), Expect = 5e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 154 PRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 291
PR++G+G+R C C +IR +GL +CR CFRE A +GF+K +
Sbjct: 11 PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE 56
>UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_44835_45248 - Giardia lamblia
ATCC 50803
Length = 137
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +1
Query: 178 RSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 288
R CR C N + + RKYGL ICR+CF+E A IGF KL
Sbjct: 100 RECRICGNYNSVYRKYGLFICRRCFKENAGKIGFVKL 136
>UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S14P -
Halobacterium salinarium (Halobacterium halobium)
Length = 52
Score = 50.4 bits (115), Expect = 6e-05
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 175 SRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
+ CR C GL+ KY + +CRQCFRE A +GFKK
Sbjct: 14 THECRRCGREQGLVGKYDIWLCRQCFREIARSMGFKK 50
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 49.6 bits (113), Expect = 1e-04
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 630 SAXMNRPXRGERRFAYWALFRFLA 701
+A MNRP RGERRFAYWALFRFLA
Sbjct: 25 AALMNRPTRGERRFAYWALFRFLA 48
>UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S14P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 61
Score = 47.6 bits (108), Expect = 4e-04
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 160 RYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 285
R GQ SC+ C GL+ KY + +CRQCFRE + +GF+K
Sbjct: 19 RTGQ-LESCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRK 59
>UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 45.2 bits (102), Expect = 0.002
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRSCSN 201
MGH+N+W SHP+ YG GSR C CS+
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCFVCSS 26
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 39.5 bits (88), Expect = 0.11
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 656 RGEAVCXLGALPFPRSXTRXXRSXGXGXRYQXTQG 760
R +C G +P PRS TR RS G G RY+ T G
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTDG 60
>UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Clostridium perfringens
Length = 61
Score = 39.1 bits (87), Expect = 0.14
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 142 WYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFREYAH 267
W P+ + CR C H +++K+G ICR CFRE A+
Sbjct: 10 WKKEPKYKTRAYTRCRLCGRPHSVLKKFG--ICRICFRELAY 49
>UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07181.1 - Gibberella zeae PH-1
Length = 59
Score = 38.7 bits (86), Expect = 0.18
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 124 MGHANIWYSHPRRYGQGSRSCRS 192
M H ++W S PR YG+GSRSC S
Sbjct: 1 MSHESVWNSRPRNYGKGSRSCAS 23
>UniRef50_P95911 Cluster: Orf c01013 protein; n=1; Sulfolobus
solfataricus|Rep: Orf c01013 protein - Sulfolobus
solfataricus
Length = 156
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 81 LICCSLARNNLIS*NGPRKYLVFSPSQIRTRIPVMPILLQQAWLNPQVRFEHMQTVL 251
L+ C + +N+LIS + P +++ PS++ + P ILL+ ++ P F++ +L
Sbjct: 49 LLICLIGKNSLIS-SDPLAVILYLPSEVFSMTPSSSILLRSGYMEPGEGFQNPHVIL 104
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 35.1 bits (77), Expect = 2.3
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 632 CXNESXXARGEAVCXLGALPFPRSXTRXXRSXGXGXRYQ-XTQGX*YGYP 778
C + AR EAV L ALP RS TR RS G G + G YG P
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDP 315
>UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Gloeobacter violaceus
Length = 68
Score = 33.1 bits (72), Expect = 9.1
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 184 CRSCSNRHGLIRKYGLNICRQCFREYAH 267
C C G IR +GL CR CFRE AH
Sbjct: 31 CWRCGRPRGYIRDFGL--CRICFREMAH 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,736,065
Number of Sequences: 1657284
Number of extensions: 8403780
Number of successful extensions: 16337
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 15978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16333
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -