Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F18
         (907 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D576B6 Cluster: PREDICTED: similar to CG1943-PA,...    37   0.81 
UniRef50_Q9VI56 Cluster: CG1943-PA, isoform A; n=5; Diptera|Rep:...    36   1.4  
UniRef50_Q9N4J9 Cluster: Putative uncharacterized protein; n=1; ...    36   1.9  
UniRef50_A5V1I9 Cluster: Tetratricopeptide TPR_2 repeat protein;...    34   4.3  
UniRef50_UPI0000EB0245 Cluster: UPI0000EB0245 related cluster; n...    34   5.7  
UniRef50_Q4V974 Cluster: Zgc:73237 protein; n=4; Danio rerio|Rep...    34   5.7  
UniRef50_Q3WH39 Cluster: Putative uncharacterized protein; n=2; ...    34   5.7  
UniRef50_Q0UM36 Cluster: Predicted protein; n=1; Phaeosphaeria n...    34   5.7  
UniRef50_A2I480 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  
UniRef50_A2QNV1 Cluster: Function: pmp1 of S. pombe has an essen...    33   7.6  

>UniRef50_UPI0000D576B6 Cluster: PREDICTED: similar to CG1943-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG1943-PA, isoform A - Tribolium castaneum
          Length = 90

 Score = 36.7 bits (81), Expect = 0.81
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1

Query: 463 KRVRVPPGGFSSGLW 507
           +RVRVPPGGFSSGLW
Sbjct: 76  RRVRVPPGGFSSGLW 90



 Score = 34.3 bits (75), Expect = 4.3
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +3

Query: 114 MTSTPFNVGLNDGARLSSRVLRPPGWWSH*HLRLRTGATEDRTPCRSTKRNE 269
           MTST    G+ +  R SSRVLRPPG   H  L L   A   +TP R +  ++
Sbjct: 1   MTSTNVFTGMGNN-RSSSRVLRPPGGGYHNILGLSNEAKISKTPERESGESD 51


>UniRef50_Q9VI56 Cluster: CG1943-PA, isoform A; n=5; Diptera|Rep:
           CG1943-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 118

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +3

Query: 114 MTSTPFNVGLNDGARLSSRVLRPPG 188
           MTST   +GL   AR SSRVL+PPG
Sbjct: 1   MTSTELKIGLTTSARPSSRVLKPPG 25


>UniRef50_Q9N4J9 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 470

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +1

Query: 142 SMTELVYQAGCSAPPXGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTS 321
           S+ E VY      PP  G+   F + P  P +    VPP A S F    G +P  T+ T+
Sbjct: 313 SLKEQVYGKPNPPPPSAGY--FFQAPPPAPASSSSTVPP-AVSPFGVPLGAQPSTTSSTT 369

Query: 322 VATN 333
            ++N
Sbjct: 370 YSSN 373


>UniRef50_A5V1I9 Cluster: Tetratricopeptide TPR_2 repeat protein;
           n=2; Roseiflexus|Rep: Tetratricopeptide TPR_2 repeat
           protein - Roseiflexus sp. RS-1
          Length = 620

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 166 AGCSAPPXGGHTNIFDSEPEPPRTGRRA-VPPSATSTFSHGQGDEPKATNGTSVATNGQS 342
           +   APP G  +++  S    P   + A  PP A+S    G    P ATNG S A+   +
Sbjct: 93  SSAGAPPDGQASSVSPSSMARPTPSQEANQPPQASSDADRGLFQLPPATNGPSPASQSSA 152

Query: 343 TPK 351
           + K
Sbjct: 153 SAK 155


>UniRef50_UPI0000EB0245 Cluster: UPI0000EB0245 related cluster; n=1;
           Canis lupus familiaris|Rep: UPI0000EB0245 UniRef100
           entry - Canis familiaris
          Length = 159

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
 Frame = +1

Query: 175 SAPPXGGHTNIFDSE-PEPPRTGRRAVPPSATSTFSHGQGDE---PKATNGTSVA 327
           S PP  G + +   E P PP+      PP  T T S+G+G +   P+A  G S A
Sbjct: 55  STPPDQGASKVLRWEGPPPPKAPGPQAPPGDTWTASYGEGGKGRSPRAAGGGSTA 109


>UniRef50_Q4V974 Cluster: Zgc:73237 protein; n=4; Danio rerio|Rep:
           Zgc:73237 protein - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 153

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 22/49 (44%), Positives = 28/49 (57%)
 Frame = +3

Query: 114 MTSTPFNVGLNDGARLSSRVLRPPGWWSH*HLRLRTGATEDRTPCRSTK 260
           MT+T    G+  GA+ SSRVLRPPG  S+    +  G TE+  P R  K
Sbjct: 1   MTTTTTFQGMEPGAKNSSRVLRPPGGASN----ISFG-TEEEKPVRKNK 44


>UniRef50_Q3WH39 Cluster: Putative uncharacterized protein; n=2;
           Frankia|Rep: Putative uncharacterized protein - Frankia
           sp. EAN1pec
          Length = 630

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 17/56 (30%), Positives = 23/56 (41%)
 Frame = +1

Query: 181 PPXGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 348
           PP         +EP PP  G  A PP+  +  + G  D P  T     A +G  +P
Sbjct: 202 PPAPAPAPAPSAEPVPPPAGSGAAPPAGATEPNSGDQDAPAGTTAPGGAGSGGDSP 257


>UniRef50_Q0UM36 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 569

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 217 EPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 348
           +P  P TG  A P    S    G+G  P+   G+   T+G STP
Sbjct: 69  DPTNPATGPNAEPTLDPSKSGEGKGKAPQKHTGSDSGTHGSSTP 112


>UniRef50_A2I480 Cluster: Putative uncharacterized protein; n=1;
           Maconellicoccus hirsutus|Rep: Putative uncharacterized
           protein - Maconellicoccus hirsutus (hibiscus mealybug)
          Length = 152

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 466 RVRVPPGGFSSGLW 507
           R RVPPGGFSSGLW
Sbjct: 139 RQRVPPGGFSSGLW 152


>UniRef50_A2QNV1 Cluster: Function: pmp1 of S. pombe has an
           essential function in Cl-homeostasis; n=1; Aspergillus
           niger|Rep: Function: pmp1 of S. pombe has an essential
           function in Cl-homeostasis - Aspergillus niger
          Length = 665

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 214 SEPEPPRTGRRAVPPSATSTFSHGQGD-EPKATNGTSVAT 330
           SEP+PP+T R  +  ++T  F  G  D E  ++NG S A+
Sbjct: 482 SEPQPPQTARTDISEASTPGFMSGSSDAEQASSNGLSQAS 521


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,205,452
Number of Sequences: 1657284
Number of extensions: 13836773
Number of successful extensions: 40364
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 37984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40303
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)