Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F18
         (907 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.12 
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         24   1.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 14/56 (25%), Positives = 25/56 (44%)
 Frame = +1

Query: 523 LLAVSLYNQIFDFHLTHIMSQICIEAKYFLRYASGCPFKILQL*SKMLKTMCVSYF 690
           LL +  +   F     H++  +CI   Y++     C F I  +   +L  +C+ YF
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTM--HLLFLLCIYYF 288


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 255 TKRNEHFQPRTRRRAESDQRH 317
           T+RN +++PRT R     ++H
Sbjct: 227 TRRNPYYRPRTSRTEPPRRKH 247


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -3

Query: 266  VALGGTARRPVLGGSGSESKMLV*PPXGGAE 174
            V L GTA  P  G SG  S     PP  G E
Sbjct: 1104 VPLKGTAVPPPSGSSGPGSTGSKSPPVAGFE 1134


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -2

Query: 258  WWNGTASGPRW 226
            WW+ T + P W
Sbjct: 1042 WWSSTTTSPWW 1052


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,095
Number of Sequences: 336
Number of extensions: 3351
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)