Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F18
         (907 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   4.2  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    24   7.3  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 19/76 (25%), Positives = 29/76 (38%)
 Frame = +1

Query: 94  VINKKTK*LQHLSTLASMTELVYQAGCSAPPXGGHTNIFDSEPEPPRTGRRAVPPSATST 273
           V +KK     HL  L + ++L   A  +    G   +  DS P PP       PP+   T
Sbjct: 33  VEHKKPARFYHLKRLVTYSKLKRAATTATIVDGRGGDYADSAPSPP------TPPTRNGT 86

Query: 274 FSHGQGDEPKATNGTS 321
               + +    T G +
Sbjct: 87  IFRYRSNSASCTGGAA 102


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +2

Query: 149 RSSSIKQGAPPPRXVVTLTSSTPNRSHRGPDAVPFHQAQR 268
           ++S++K+G PP R V  + +    R   G     F + ++
Sbjct: 221 KASTVKRGTPPGRKVGLIAARRTGRIRGGKGDEKFKEKEK 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,818
Number of Sequences: 2352
Number of extensions: 14928
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97987887
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)