Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F18
         (907 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB065600-1|BAC05828.1|  727|Homo sapiens seven transmembrane hel...    33   1.4  
BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated ind...    31   7.6  
AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein pr...    31   7.6  
AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.     31   7.6  

>AB065600-1|BAC05828.1|  727|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 727

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 299 GSSPCPWLKVLVALG--GTARRPVLGGSGSESKMLV*PPXGGA 177
           GS  CPW  +L+     G    P+L  + + + MLV PP G A
Sbjct: 243 GSERCPWASLLLPCSACGAVPSPLLSSASARNAMLVVPPGGRA 285


>BC052950-1|AAH52950.1| 1008|Homo sapiens G protein regulated
           inducer of neurite outgrowth 1 protein.
          Length = 1008

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 181 PPXGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 348
           P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  +G++ P
Sbjct: 481 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 537


>AL834165-1|CAD38868.1|  707|Homo sapiens hypothetical protein
           protein.
          Length = 707

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 181 PPXGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 348
           P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  +G++ P
Sbjct: 291 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 347


>AB067480-1|BAB67786.1|  800|Homo sapiens KIAA1893 protein protein.
          Length = 800

 Score = 30.7 bits (66), Expect = 7.6
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +1

Query: 181 PPXGGHTNIFDSEPEPPRTGRRAVPPSATST--FSHGQGDEPKATNGTSVATNGQSTP 348
           P   G TN   S P  PR+   A PPSA      + G+GD P ++    +  +G++ P
Sbjct: 483 PESSGKTNPVSSGPGDPRSLGTAGPPSAVKAEPATGGKGD-PLSSEKAGLVASGKAAP 539


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,330,041
Number of Sequences: 237096
Number of extensions: 2163932
Number of successful extensions: 5674
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5652
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)