Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F17
(917 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45575| Best HMM Match : Keratin_B2 (HMM E-Value=8.8) 37 0.026
SB_39266| Best HMM Match : DCX (HMM E-Value=9.4e-15) 37 0.026
SB_54556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_54315| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_49553| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_46297| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_45642| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_45413| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_40025| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_37523| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_36248| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_33560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_33172| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_30123| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_24881| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_13522| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_13466| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_12912| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_10334| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_8826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_7776| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_6431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_5711| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_5382| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_4800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_1110| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_457| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_58797| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_53281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_39623| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_39403| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_35631| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_32025| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_29245| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_26817| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_22420| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_2684| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 1.7
SB_39971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_25122| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
>SB_45575| Best HMM Match : Keratin_B2 (HMM E-Value=8.8)
Length = 271
Score = 36.7 bits (81), Expect = 0.026
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +2
Query: 539 GIXXXKXXNQXAXKXPEPXKXPLGXRFPXGPAPLNKLPKXRPXXQRXQTPXGX*KSXXFP 718
GI + Q A K P K P RF G APL + K + +T + FP
Sbjct: 88 GITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP 147
Query: 719 LKPPXC 736
L+ P C
Sbjct: 148 LEAPSC 153
>SB_39266| Best HMM Match : DCX (HMM E-Value=9.4e-15)
Length = 347
Score = 36.7 bits (81), Expect = 0.026
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = +2
Query: 539 GIXXXKXXNQXAXKXPEPXKXPLGXRFPXGPAPLNKLPKXRPXXQRXQTPXGX*KSXXFP 718
GI + Q A K P K P RF G APL + K + +T + FP
Sbjct: 117 GITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFP 176
Query: 719 LKPPXC 736
L+ P C
Sbjct: 177 LEAPSC 182
>SB_54556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_54315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_49553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_46297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFGWPFAHMFFRALSP 50
>SB_45642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_45413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_40025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_37523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_36248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_33560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_33172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_30123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_24881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_13522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_13466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_12912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_10334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_8826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_7776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_6431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_5711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_5382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_4800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_1110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_58797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_53281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_39623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_39403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_35631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_32025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 58 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 92
>SB_29245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_26817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_22420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_2684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.5 bits (68), Expect = 0.99
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
SGGR L +NA AA R LA PF F P
Sbjct: 16 SGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 50
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = -2
Query: 895 GGXXPPXLGXXDLXPEXGEPXXXXXLGKGPXXPGXGEXXTXXPXXGQGXXKGGAXGXFQG 716
GG PP G G+P G GP PG G+ P GQ G G
Sbjct: 545 GGPPPPGAGQG-----WGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGG 599
Query: 715 EXXGFLXSXRGLPPLXXG 662
GLPP G
Sbjct: 600 PPPPGAGQGWGLPPPGSG 617
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.7 bits (66), Expect = 1.7
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +3
Query: 753 PCPLXGXXVXXSPXPGKXGPXPKXXXLXGSPXS--GXRSXXPXWG-GXXPPXPTVP 911
P P+ G P P GP P + G P S G P G G PP P +P
Sbjct: 355 PPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPPPGRGAPPPGPMIP 410
>SB_39971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 641 SGGRGLXENAXQAAXXRVLAXWXPFGXXXFXGXXP 537
+GGR L +NA AA R LA PF F P
Sbjct: 92 AGGRSLWKNASNAAFLRFLAFCWPFAHMFFPALSP 126
>SB_25122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 731 GXVSGGXXXIFIXXXGFAXFXLXVXFWEACSGGRGLXENA 612
G G IFI GFA L V F +AC GG + A
Sbjct: 16 GSRQGETLGIFIVLSGFATTDLSVRFRDACQGGGAYGKTA 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,518,572
Number of Sequences: 59808
Number of extensions: 166118
Number of successful extensions: 193
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2657535823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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