Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F17
         (917 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1625|AAF54898.1|  460|Drosophila melanogaster CG11670-P...    34   0.24 
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    29   8.9  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    29   8.9  

>AE014297-1625|AAF54898.1|  460|Drosophila melanogaster CG11670-PA
           protein.
          Length = 460

 Score = 34.3 bits (75), Expect = 0.24
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +3

Query: 696 YKNPXXSP*NXPXAPPFXXPCPLXGXXVXXSPXPGKXGPXP 818
           Y+NP  +P   P  PP   P P  G     SP PG   P P
Sbjct: 37  YRNPNPNPVPDPTRPPPPPPSPPCGRPPPGSPPPGPPPPGP 77


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +3

Query: 729 PXAPPFXXPCPLXGXXVXXSPXPGKXGPXPKXXXLXGSPXSGXRSXXPXWGGXXPPXPTV 908
           P  PP   P P  G      P P K  P P        P  G     P      PP P  
Sbjct: 208 PPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQPPRPQP 267

Query: 909 P 911
           P
Sbjct: 268 P 268


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
           protein.
          Length = 420

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +3

Query: 729 PXAPPFXXPCPLXGXXVXXSPXPGKXGPXPKXXXLXGSPXSGXRSXXPXWGGXXPPXPTV 908
           P  PP   P P  G      P P K  P P        P  G     P      PP P  
Sbjct: 208 PPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPPPGPGPAQPAPQPPRPQPPRPQP 267

Query: 909 P 911
           P
Sbjct: 268 P 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,942,209
Number of Sequences: 53049
Number of extensions: 326271
Number of successful extensions: 510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)