Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F13
(843 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 202 2e-52
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 202 2e-52
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 168 5e-42
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.8
U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical pr... 30 2.4
U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 29 5.5
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 29 5.5
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 28 7.2
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical pr... 28 9.5
U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical pr... 28 9.5
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 28 9.5
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 28 9.5
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 28 9.5
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 28 9.5
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 28 9.5
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 202 bits (494), Expect = 2e-52
Identities = 103/184 (55%), Positives = 130/184 (70%), Gaps = 4/184 (2%)
Frame = +1
Query: 172 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 342
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 343 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 519
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 520 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 699
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 700 LPLL 711
L +L
Sbjct: 203 LQIL 206
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = +2
Query: 719 KSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALK 829
++I++ L+ YDS+D DVLQSY+E+SLA L++Y +K
Sbjct: 209 EAIKAKEALSTYDSVDDDVLQSYSEYSLAQLIYYGMK 245
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 202 bits (494), Expect = 2e-52
Identities = 103/184 (55%), Positives = 130/184 (70%), Gaps = 4/184 (2%)
Frame = +1
Query: 172 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 342
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 343 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 519
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 520 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 699
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 700 LPLL 711
L +L
Sbjct: 203 LQIL 206
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/37 (51%), Positives = 30/37 (81%)
Frame = +2
Query: 719 KSIESASKLTAYDSLDSDVLQSYTEFSLASLLFYALK 829
++I++ L+ YDS+D DVLQSY+E+SLA L++Y +K
Sbjct: 209 EAIKAKEALSTYDSVDDDVLQSYSEYSLAQLIYYGMK 245
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 168 bits (408), Expect = 5e-42
Identities = 87/154 (56%), Positives = 107/154 (69%), Gaps = 4/154 (2%)
Frame = +1
Query: 172 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 342
R ATLK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 343 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 519
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 520 LQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 621
LQRLY I+ NEIGR PP+F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 292 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 450
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical
protein C41G11.4b protein.
Length = 514
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 732 APAS*RHTTLWTATYSNPTRSSRW 803
APAS R TLW T R++RW
Sbjct: 440 APASARSNTLWVVTVDTARRNARW 463
>U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical
protein C41G11.4a protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 732 APAS*RHTTLWTATYSNPTRSSRW 803
APAS R TLW T R++RW
Sbjct: 419 APASARSNTLWVVTVDTARRNARW 442
>Z93386-2|CAB07647.1| 387|Caenorhabditis elegans Hypothetical
protein R11H6.3 protein.
Length = 387
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 653 SFITSSSLWYRTPSPTCPFYTKKSIESASKLTAYDSL 763
S TSS L +P CPF +K + S ++L+ +S+
Sbjct: 313 SMCTSSQLSINDEAPKCPFMSKSANNSVTRLSCSESV 349
>Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical
protein F41D3.3 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = -1
Query: 606 QLTCVQESRWETSNLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFRYTS 427
Q+ V++ R++ + I + N+++++Q + H +D+L A+ + HF++
Sbjct: 146 QVESVEKQRFKNALQIQSVNELVTLQRTSTDSCL--HCPGVDILDRESAQALRKHFQFAD 203
Query: 426 VY 421
V+
Sbjct: 204 VW 205
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 490 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 615
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 490 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 615
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +2
Query: 545 SLVLLMRLDVSHLLSWTQVSWPLPFSPQDTSLVPERSFITS 667
SL LL R+D +H L W S P PF SL P S I S
Sbjct: 560 SLDLLSRIDGAHELLWFPPSLP-PFVKLFASLTPGGSLIYS 599
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 638 LVPERSFITSSSLWYRTPSPTC---PFYTKKSIESASKLTAYD 757
++P+ S+S+W RTP+P PF+ +K + S + A +
Sbjct: 100 IIPQNPESPSASVWNRTPTPPVEIKPFHCQKCTKLFSTIAALE 142
>Z66499-6|CAA91299.2| 765|Caenorhabditis elegans Hypothetical
protein T01B7.6 protein.
Length = 765
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = -2
Query: 509 DLSPTQITLMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGGVTSALS 336
D T M + G LR + TPV +PL +N LGSS G ++S S
Sbjct: 544 DFKMTSSIPMTNGLGHLRLGSVWSGTPVEAKQEEPLHYFQQQDNFLGSSFGPISSTFS 601
>U67950-1|AAP13771.1| 465|Caenorhabditis elegans Hypothetical
protein T01B6.3a protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = -1
Query: 621 ENGSGQLTC--VQESRWETSNLISN 553
E GSG + C VQ S WE +N+IS+
Sbjct: 233 EIGSGNIICSGVQNSVWEAANIISH 257
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 638 LVPERSFITSSSLWYRTPSPTC---PFYTKKSIESASKLTAYD 757
++P+ S+S+W RTP+P PF+ +K + S + A +
Sbjct: 100 IIPQNPESPSASVWNRTPTPPVEIKPFHCQKCTKLFSTIAALE 142
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 577 PPTFLDASQLATAILTSGYEFGSGKI 654
PPTF D + A + GY FG KI
Sbjct: 3 PPTFADLGKSAKDLFNKGYNFGFLKI 28
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 367 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 480
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 367 DPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAEN 480
+PK+L + +RGL VS +++NRL+E G+EN
Sbjct: 230 NPKELLQFLKLNRGLFFIRSNKVS-LVKNRLNEDGSEN 266
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 27.9 bits (59), Expect = 9.5
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -1
Query: 522 QDTARFISHTDHLDVLSTRFAETVADHFRYTSVYSSAQTSVRGH-SNKQLLGVIFG-RCN 349
+++ARFI+ D DVL R A T A+ F+ + H N + FG + +
Sbjct: 293 KESARFITFLDLDDVLIPRLAPTYAEEFQKLMDGKKKLAYIFYHKENYDAVTTRFGSKFS 352
Query: 348 LSP-FIELYCTFTIGTSSFQVTLSTGVFSS*HHLHGLCDFLD 226
L F L C + S++Q GV H+ L F D
Sbjct: 353 LKKMFGSLACKHKVNESNYQ---DVGVQMGKRHIIRLSSFKD 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,105,414
Number of Sequences: 27780
Number of extensions: 457418
Number of successful extensions: 1224
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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