Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F13
(843 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial... 93 2e-19
At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast... 66 2e-11
At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast... 63 2e-10
At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associate... 30 1.7
At5g57890.1 68418.m07242 anthranilate synthase beta subunit, put... 24 2.2
At5g24550.1 68418.m02899 glycosyl hydrolase family 1 protein con... 30 2.2
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 29 2.9
At5g19130.2 68418.m02277 GPI transamidase component family prote... 29 5.1
At5g19130.1 68418.m02276 GPI transamidase component family prote... 29 5.1
At3g60140.1 68416.m06715 glycosyl hydrolase family 1 protein con... 28 6.8
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 28 6.8
At2g36670.1 68415.m04497 aspartyl protease family protein contai... 28 6.8
At2g13800.1 68415.m01523 leucine-rich repeat family protein / pr... 28 6.8
At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like fami... 28 8.9
At4g01380.1 68417.m00178 plastocyanin-like domain-containing pro... 28 8.9
>At2g33040.1 68415.m04052 ATP synthase gamma chain, mitochondrial
(ATPC) identical to SP|Q96250 ATP synthase gamma chain,
mitochondrial precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase
Length = 325
Score = 93.1 bits (221), Expect = 2e-19
Identities = 62/195 (31%), Positives = 107/195 (54%), Gaps = 2/195 (1%)
Frame = +1
Query: 172 RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEV 351
R+++T + + R+KSVKNIQKIT++MKMV+A+K + + +R + F
Sbjct: 41 RSIST-QVVRNRMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQ---PFTALLGD 96
Query: 352 TPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR--NRLSEPGAENIKVICVGDKSRGILQ 525
P D K + V ++SD+GLCG +++ V KV R +L+ + ++ + VG+K++ I+
Sbjct: 97 NPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMF 156
Query: 526 RLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSDLP 705
R I+ E+ + P + S LA IL EF + +I+YNKF SVV++ +
Sbjct: 157 RDSKNDIVLSVTELNKNPLNYAQVSVLADDIL-KNVEFDALRIVYNKFHSVVAFLPTVST 215
Query: 706 LLH*EVY*ERQQADG 750
+L E+ + + G
Sbjct: 216 VLSPEIIEKESEIGG 230
>At4g04640.1 68417.m00679 ATP synthase gamma chain 1, chloroplast
(ATPC1) identical to SP|Q01908 ATP synthase gamma chain
1, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}
Length = 373
Score = 66.5 bits (155), Expect = 2e-11
Identities = 59/183 (32%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Frame = +1
Query: 181 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYERAEVTPP 360
A+L+ + R+ SVKN QKIT++MK+V+AAK RA+ + RP+ E V+
Sbjct: 51 ASLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQ 110
Query: 361 EDD-----------PKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 501
DD K V +T DRGLCG + + K R+ E ++ VI VG
Sbjct: 111 TDDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVG 170
Query: 502 DKSRG-ILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFK 672
K L+R Y + E G L PT +A +A + L E +++Y KF
Sbjct: 171 KKGNSYFLRRPYIP--VDKYLEAGTL-PTAKEAQAVADDVFSLFISEEVDKVELLYTKFV 227
Query: 673 SVV 681
S+V
Sbjct: 228 SLV 230
>At1g15700.1 68414.m01884 ATP synthase gamma chain 2, chloroplast
(ATPC2) identical to SP|Q01909 ATP synthase gamma chain
2, chloroplast precursor (EC 3.6.3.14) {Arabidopsis
thaliana}; contains Pfam profile: PF00231 ATP synthase;
similar to ATP synthase gamma-subunit GI:21241 from
[Spinacia oleracea]
Length = 386
Score = 63.3 bits (147), Expect = 2e-10
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 15/193 (7%)
Frame = +1
Query: 181 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQ-FYERAEVTP 357
A ++ + R+ SVKN QKIT++M++V+AA+ RA+ + RP+ E V+ Y +
Sbjct: 61 AGIRELRERIDSVKNTQKITEAMRLVAAARVRRAQDAVIKGRPFTETLVEILYSINQSAQ 120
Query: 358 PEDDPKQL----------FVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIK--VICVG 501
ED L V +T D+GLCG + V+K R+ E I VI VG
Sbjct: 121 LEDIDFPLSIVRPVKRVALVVVTGDKGLCGGFNNAVTKKATLRVQELKQRGIDCVVISVG 180
Query: 502 DKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATAI--LTSGYEFGSGKIIYNKFKS 675
K R + + E G + PT +A +A + L E +++Y KF
Sbjct: 181 KKGNAYFSR-RDEFDVDKCIEGGGVFPTTKEAQVIADDVFSLFVSEEVDKVELVYTKF-- 237
Query: 676 VVSYAQSDLPLLH 714
VS +SD P++H
Sbjct: 238 -VSLVKSD-PVIH 248
>At4g33430.1 68417.m04750 brassinosteroid insensitive 1-associated
receptor kinase 1 (BAK1) / somatic embryogenesis
receptor-like kinase 3 (SERK3) identical to SP|Q94F62
BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase
1 precursor (EC 2.7.1.37) (BRI1-associated receptor
kinase 1) (Somatic embryogenesis receptor-like kinase 3)
{Arabidopsis thaliana}; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain;
identical to cDNA somatic embryogenesis receptor-like
kinase 3 (SERK3) GI:14573458
Length = 615
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Frame = +1
Query: 337 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 507
ER E PP D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 377 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDF 435
Query: 508 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 633
L H+ +V IG + P +L + + GY
Sbjct: 436 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 478
>At5g57890.1 68418.m07242 anthranilate synthase beta subunit,
putative strong similarity to anthranilate synthase beta
chain GI:403434 [Arabidopsis thaliana]
Length = 273
Score = 24.2 bits (50), Expect(2) = 2.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 623 VRMAVAN*LASKKVGGRRPISLATLMMCFPYNLCRIPRDL 504
+ MA +N ++S V PI + F YNLC+ +L
Sbjct: 53 IEMAESNSISSVVVNSSGPIIVIDNYDSFTYNLCQYMGEL 92
Score = 24.2 bits (50), Expect(2) = 2.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 485 LMFSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSSSGG 354
L+ PG+ + I+L T + P PL V C+G + GG
Sbjct: 118 LISPGPGTPQDSGISLQTVLELGPLVPLFGVCMGLQCIGEAFGG 161
>At5g24550.1 68418.m02899 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to anther-specific protein ATA27 (GI:2746341)
[Arabidopsis thaliana]
Length = 534
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -1
Query: 576 ETSNLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFRY 433
E S ++ N+ D + + TARF++H H+D+ RF T H +Y
Sbjct: 327 EQSMMLQNSFDFIGINYY--TARFVAHDLHVDLSRPRF--TTDQHLQY 370
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +1
Query: 337 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 507
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 382 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAV-VGDF 440
Query: 508 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 633
L H+ +V IG + P +L + + GY
Sbjct: 441 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 483
>At5g19130.2 68418.m02277 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 696
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 560 LATLMMCFPYNLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCT 420
L ++ PY +C++P SPT ++M+ S L + P C+
Sbjct: 508 LGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLLLITFVTMPGCS 554
>At5g19130.1 68418.m02276 GPI transamidase component family protein
/ Gaa1-like family protein contains Pfam profile:
PF04114 Gaa1-like, GPI transamidase component
Length = 699
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 560 LATLMMCFPYNLCRIPRDLSPTQITLMFSAPGSLRRLRITLDTPVCT 420
L ++ PY +C++P SPT ++M+ S L + P C+
Sbjct: 511 LGFIVTLLPYFICQVPGQHSPTNRSIMWGTTSSSLLLITFVTMPGCS 557
>At3g60140.1 68416.m06715 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to Cyanogenic Beta-Glucosidase
(GI:1311386)(pdb:1CBG) [Trifolium Repens]; identical
beta-glucosidase GI:10834547
Length = 577
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 576 ETSNLISNTNDVLSVQSLQDTARFISHTDHLDVLSTRF 463
E S ++ N++D + + TARF +H H+D RF
Sbjct: 321 EQSKMLQNSSDFVGINYY--TARFAAHLPHIDPEKPRF 356
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 479 FSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSS 363
F APGSL +T P+C++ + + + NN G S
Sbjct: 147 FDAPGSLTAGSVTCSDPICSSVFQTTAAQCSENNQCGYS 185
>At2g36670.1 68415.m04497 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 512
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 479 FSAPGSLRRLRITLDTPVCTAPHKPLSEVIATNNCLGSS 363
F APGSL +T P+C++ + + + NN G S
Sbjct: 152 FDAPGSLTAGSVTCSDPICSSVFQTTAAQCSENNQCGYS 190
>At2g13800.1 68415.m01523 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 601
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
Frame = +1
Query: 337 ERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGA---ENIKVICVGDK 507
ER E P D PK+ +A+ S RGL K+I + E + + VGD
Sbjct: 363 ERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAV-VGDF 421
Query: 508 SRGILQRLYGKHI-ISVANEIGRLPPTFLDASQLATAILTSGY 633
L H+ +V IG + P +L + + GY
Sbjct: 422 GLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 464
>At4g02350.1 68417.m00319 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 771
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 507 FISHTDHLDVLSTRFAETVADHFRYTSVYSSAQTSVRGHSNKQLLG 370
F H HL + R AE HF T ++A+ ++ G K++ G
Sbjct: 536 FFRHAAHLSGVPLRMAERGRRHFPLTKSQNTAEDTLSGMLKKKIDG 581
>At4g01380.1 68417.m00178 plastocyanin-like domain-containing
protein
Length = 210
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 582 YFLGRKSVGHCHSHLRIRV 638
YF+ K+ GHC++ L++RV
Sbjct: 152 YFISSKTPGHCYAGLKLRV 170
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,175,262
Number of Sequences: 28952
Number of extensions: 436974
Number of successful extensions: 1184
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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