Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F12
         (903 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   4.3  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.7  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    22   5.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   7.6  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   10.0 

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 279 NLNDSQTNNKKNGENAKSKERKVLSRLPPGA-TPAGVFPSPPPR 407
           N N      ++NG+++ +K ++++S  P    +     PSPPP+
Sbjct: 192 NYNPFAKGFRENGKSS-AKRKQLVSEHPDSPNSKKSATPSPPPQ 234


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 342 YVLYF*RFHHFSYYLFDCH*DYLLVI 265
           YV++  R  +  Y+LF CH  + +VI
Sbjct: 654 YVIFRFRADNPGYWLFHCHFLFHIVI 679


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 399 PPRGVLVIRTPRGPDGTKGFL 461
           PP GVL  + P+ P+   G L
Sbjct: 9   PPFGVLRFKAPQPPENWTGVL 29


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +3

Query: 162 EQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQ 296
           + +Q   ++ARLR    +  PE  I+DK  +  D    + L + +
Sbjct: 46  QTKQSVLDEARLRANDSSVDPEIDIEDKPAQKIDGEDDSGLTEEE 90


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 4/17 (23%), Positives = 14/17 (82%)
 Frame = +1

Query: 802 YICILICLQRHKNKSVH 852
           ++C+++C+ R K ++++
Sbjct: 161 FLCVIVCIFRGKYRNIN 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,895
Number of Sequences: 336
Number of extensions: 4272
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)