Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F12
(903 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0149 - 15108796-15109353,15109590-15110756,15111571-151116... 32 0.54
11_07_0003 - 27182551-27183054 32 0.72
09_02_0278 + 6691685-6692188 32 0.72
09_06_0010 - 20193577-20193921,20194014-20194160,20194239-201944... 31 0.95
06_01_0397 + 2855273-2855347,2855515-2855606,2856317-2856347,285... 31 0.95
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 31 1.3
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.9
03_06_0443 + 33973229-33973311,33973422-33973510,33974873-339750... 30 2.9
03_02_0161 + 6046949-6047063,6048759-6048844,6049029-6049094,604... 29 3.8
03_01_0046 - 384444-384460,384649-384770,385144-385301,385379-38... 29 3.8
09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148 29 5.1
09_02_0327 - 7284829-7284889,7284946-7286126 29 5.1
07_03_1711 + 28909297-28909329,28909725-28910204,28910300-289104... 29 5.1
06_03_0371 - 19990168-19990584 29 5.1
12_02_0306 + 17307166-17309091 29 6.7
10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878 29 6.7
09_06_0332 + 22382508-22383214,22383576-22383631,22383673-223840... 28 8.8
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672 28 8.8
05_04_0301 + 19983073-19983196,19984508-19985105,19985190-199854... 28 8.8
>09_04_0149 -
15108796-15109353,15109590-15110756,15111571-15111640,
15113747-15113808
Length = 618
Score = 32.3 bits (70), Expect = 0.54
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 270 QANNLNDSQTNNKKNGENAKSKERKVLSRLPP-GATPAGVFPSPPP 404
++ + D ++K GEN K E S+ PP A PA V PSP P
Sbjct: 563 RSRRIFDKIWSSKGQGENGKGSETSGSSQSPPLSAKPADVKPSPLP 608
>11_07_0003 - 27182551-27183054
Length = 167
Score = 31.9 bits (69), Expect = 0.72
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -3
Query: 460 RKPLVPSGPRGVRITSTPR----GGGDGNTPAGV-APGGSR 353
R P P GVR +T R GGG G T AG +PGG R
Sbjct: 71 RNPATTGSPGGVRSPATARAGSPGGGTGTTLAGAGSPGGGR 111
>09_02_0278 + 6691685-6692188
Length = 167
Score = 31.9 bits (69), Expect = 0.72
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -3
Query: 460 RKPLVPSGPRGVRITSTPR----GGGDGNTPAGV-APGGSR 353
R P P GVR +T R GGG G T AG +PGG R
Sbjct: 71 RNPATTGSPGGVRSPATARAGSPGGGTGTTLAGAGSPGGGR 111
>09_06_0010 -
20193577-20193921,20194014-20194160,20194239-20194495,
20194619-20194826
Length = 318
Score = 31.5 bits (68), Expect = 0.95
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +3
Query: 207 GEARSPEDIIDDKLTRLQDKLQANNLNDSQTNNKKNGENAKSKERKVLSRLPPGATPAGV 386
GE + + + ++ + + L A ++ ++NK +G N +K R LPP +
Sbjct: 195 GEVKVQRRMQEKRVQKYVESLDAIRAKNAASHNKASG-NGHAKPRA--PHLPPPVSQRRQ 251
Query: 387 FPSPPPRGVLVIRTPRGP 440
F +PPP +T P
Sbjct: 252 FQAPPPAAPTTTKTAAAP 269
>06_01_0397 +
2855273-2855347,2855515-2855606,2856317-2856347,
2856687-2856830,2856935-2857162,2857374-2857487,
2857749-2858249
Length = 394
Score = 31.5 bits (68), Expect = 0.95
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 207 GEARSPEDIIDDKLTRLQDKLQ-ANNLNDSQTNNKKNGENAKSKERKVLSRLPPGATPAG 383
G+A+ + +LQ + +NN+ND + KK+ + +++ V + P P
Sbjct: 277 GQAKKENASTNPSALKLQGSISLSNNINDRKAPKKKSSPSPPDQKKPVAASPPDQKKPVA 336
Query: 384 VFPSPPPRGVLVIRTPRGPDGTK 452
+ SPP V TP PD K
Sbjct: 337 L--SPPDHKKTV--TPSPPDQKK 355
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 31.1 bits (67), Expect = 1.3
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Frame = +3
Query: 102 MKLLVGQLNGENRARPVKTLEQR--QKEYEQARLRI---LGEARSPEDIIDDKLTRLQDK 266
MK+ +L RAR K E+R ++E E+ R+RI L EA+ E+ + K +
Sbjct: 183 MKIKAQELR--ERARKKKEEEERRMEREREKERIRIGKELLEAKRIEEDNERKRMIELRR 240
Query: 267 LQANNLNDSQTNNKKNGENAKSKERKVLSRLPPGATPAGVFPSPPP 404
L+ ++ ++ E K++ R+ L LPP PA PS PP
Sbjct: 241 LEKEEEKRAREKIRQKLEEDKAERRRKLG-LPP-EDPAAPKPSAPP 284
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3
Query: 445 PSGPRGVRITSTPRGGGDGNTPAGVAPGG 359
P G RG + P GGG G P G APGG
Sbjct: 161 PGGGRGGALGRPPGGGGGGGGP-GRAPGG 188
>03_06_0443 +
33973229-33973311,33973422-33973510,33974873-33975024,
33975463-33975579,33975729-33975776,33976169-33976312,
33976715-33976858
Length = 258
Score = 29.9 bits (64), Expect = 2.9
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 84 KVGKIWMK-LLVGQLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQ 260
KV KIW+K LLV L E++ R + E+ L IL EA P IID +L Q
Sbjct: 147 KVCKIWVKLLLVALLISEDKLR-----GKPGYEHLSDPLHILIEAEFPASIIDARLRHAQ 201
Query: 261 DKLQ 272
+ ++
Sbjct: 202 EVIE 205
>03_02_0161 +
6046949-6047063,6048759-6048844,6049029-6049094,
6049408-6049860,6049960-6050115,6050319-6050465,
6050570-6050641,6050730-6051293
Length = 552
Score = 29.5 bits (63), Expect = 3.8
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Frame = +3
Query: 135 NRARPVKT-LEQR---QKEYEQARLRILGEARSP--EDIIDDKLTRLQDKLQANNLNDSQ 296
++ PVK LE+R Q E ++ R +I +S E ++DKL R L+ + N+S
Sbjct: 325 DKLMPVKRWLEERRLLQGEIQRLRDKIAMAEKSAKAEAQLNDKLRRKLKALEDDMRNESS 384
Query: 297 TNNKKNGENAKSKE 338
+ N +NA SK+
Sbjct: 385 NTSASNKDNATSKQ 398
>03_01_0046 -
384444-384460,384649-384770,385144-385301,385379-385479,
385748-385823,385983-386093,386165-386356,386729-387024,
388299-388497
Length = 423
Score = 29.5 bits (63), Expect = 3.8
Identities = 26/97 (26%), Positives = 44/97 (45%)
Frame = +3
Query: 123 LNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTN 302
+N + R R + L ++++ Q R + L + + E+ D++ L + L N +
Sbjct: 239 INDDPRIRLLNRLYAKKRKELQERQK-LKDVQVQEEQKDER--SLDEILCFINGDGGSGG 295
Query: 303 NKKNGENAKSKERKVLSRLPPGATPAGVFPSPPPRGV 413
K + K+K RK S+ PP A P V RGV
Sbjct: 296 GKASKNKKKNKRRKDHSKNPPKANPEPVNKEEATRGV 332
>09_04_0305 - 16516481-16516638,16517135-16517274,16519196-16520148
Length = 416
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = -3
Query: 505 SWKLIITVLKYC--YLFRKPLVPSGPRGVRITSTPRGGGDGNTPAG 374
SW L TV+ YL L P PR + + GGGDG++ G
Sbjct: 241 SWYLTATVVFVVVFYLHLTKLYPEEPRYLPLVKGGGGGGDGDSDGG 286
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 333 KERKVLSRLPPGATPAGVFPSPPPRGVLVIRTPRGPD 443
KER + PP P P PPPRG R G D
Sbjct: 44 KERIIFGAHPPPPPPPPPPPPPPPRGRRYYRRVSGDD 80
>07_03_1711 +
28909297-28909329,28909725-28910204,28910300-28910428,
28910511-28910567,28910669-28910761,28911278-28911483,
28912757-28912898,28912981-28913170,28913263-28913369
Length = 478
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3
Query: 369 ATPAGVFPSPPPRGVLVIRTPRGPD 443
A V PSPPP G + RTP PD
Sbjct: 30 AEQEAVKPSPPPPGRIRYRTPSSPD 54
>06_03_0371 - 19990168-19990584
Length = 138
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 334 KNVKCYLGFHLELPQLEYFHLHLHEECLL 420
+ +K + F+L+ P L HLHLH + LL
Sbjct: 107 QRIKEKIDFYLQAPALPRHHLHLHHQRLL 135
>12_02_0306 + 17307166-17309091
Length = 641
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 430 GVRITSTPRGGGDGNTPAGVAPGGSRD 350
G + S+ GGGDG G A GG+RD
Sbjct: 219 GADVGSSLTGGGDGTLCGGGARGGARD 245
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 430 GVRITSTPRGGGDGNTPAGVAPGGSRD 350
G + S+ GGGDG G A GG+RD
Sbjct: 370 GADVGSSLTGGGDGTLCGGGARGGARD 396
>10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878
Length = 947
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 288 DSQTNNKKNGENAKSKERKVLSRLPPGATPAGVFPSPPPRGVLVIRTPRGPDGTKGF 458
DS ++ GE + ER+++ GV PPP+G + R G G GF
Sbjct: 759 DSSRRRQREGEKIEEAERRLMYHQSAPPPHIGV---PPPQGGFLPRQIGGGSGRPGF 812
>09_06_0332 +
22382508-22383214,22383576-22383631,22383673-22384004,
22384395-22384445
Length = 381
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 135 NRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDK 245
+RA K++E+R++EY +AR RI S + D +
Sbjct: 113 SRANLQKSVEERKEEYNKARARIFNNNSSSGNAADGR 149
>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
Length = 641
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 53 MAAQDEVDVCESWEDMDEIIGWAVKRRESC 142
M A +V V E +E +GW V R ESC
Sbjct: 1 MEAPRDVVVSELFEHQKAALGWLVHREESC 30
>05_04_0301 +
19983073-19983196,19984508-19985105,19985190-19985442,
19985947-19985979
Length = 335
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +3
Query: 117 GQLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQ 296
G +N A +T+E+R +EY +AR RI + S + D + + N+
Sbjct: 149 GDAGAKNNA--ARTVEERIEEYNKARARIFNGSISDIEGTSDLGALSVARDEPINVEPPV 206
Query: 297 TNNKKNGENAKSK 335
NK N N++S+
Sbjct: 207 DENKVNTMNSRSR 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,216,231
Number of Sequences: 37544
Number of extensions: 434003
Number of successful extensions: 2029
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2013
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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