Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F12
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical p... 33 0.21
Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical pr... 33 0.21
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 32 0.65
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 32 0.65
Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical p... 31 0.85
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83246-3|CAB05843.2| 292|Caenorhabditis elegans Hypothetical pr... 30 2.0
U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 29 4.5
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 29 4.5
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical pr... 29 6.0
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z78418-5|CAB01694.2| 361|Caenorhabditis elegans Hypothetical pr... 28 7.9
L15314-3|AAF99986.2| 393|Caenorhabditis elegans Gtp exchange fa... 28 7.9
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 28 7.9
>Z70034-10|CAI79119.2| 560|Caenorhabditis elegans Hypothetical
protein C18E9.3c protein.
Length = 560
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 132 ENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTNNKK 311
+ +P T E+RQ Y+ AR RILG P++ ++ + L +Q N +
Sbjct: 118 QKEKQPAPTYEERQAAYQAARNRILGTEYKPDNQEIKEIKFIDRSKSPETLKMTQQNMVE 177
Query: 312 NGENAKSKE--RKVLSRLPPGA--TPAGVFPSPPP 404
+ S+E + +PP TP PPP
Sbjct: 178 HYGEELSRELMEQPAEIVPPERQYTPDFTLQQPPP 212
>Z70034-3|CAA93860.2| 620|Caenorhabditis elegans Hypothetical
protein C18E9.3b protein.
Length = 620
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 132 ENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTNNKK 311
+ +P T E+RQ Y+ AR RILG P++ ++ + L +Q N +
Sbjct: 178 QKEKQPAPTYEERQAAYQAARNRILGTEYKPDNQEIKEIKFIDRSKSPETLKMTQQNMVE 237
Query: 312 NGENAKSKE--RKVLSRLPPGA--TPAGVFPSPPP 404
+ S+E + +PP TP PPP
Sbjct: 238 HYGEELSRELMEQPAEIVPPERQYTPDFTLQQPPP 272
>Z70034-2|CAA93854.3| 623|Caenorhabditis elegans Hypothetical
protein C18E9.3a protein.
Length = 623
Score = 33.5 bits (73), Expect = 0.21
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +3
Query: 132 ENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTNNKK 311
+ +P T E+RQ Y+ AR RILG P++ ++ + L +Q N +
Sbjct: 181 QKEKQPAPTYEERQAAYQAARNRILGTEYKPDNQEIKEIKFIDRSKSPETLKMTQQNMVE 240
Query: 312 NGENAKSKE--RKVLSRLPPGA--TPAGVFPSPPP 404
+ S+E + +PP TP PPP
Sbjct: 241 HYGEELSRELMEQPAEIVPPERQYTPDFTLQQPPP 275
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 333 KERKVLSRLPPGATPAGVFPSPPPRGVLVIRTPRGPDGTKG 455
KE +LS P + P + P P P+G + + P+GP G KG
Sbjct: 146 KEGSILSSALPPSEPCIICP-PGPQGAVGQQGPKGPPGPKG 185
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 333 KERKVLSRLPPGATPAGVFPSPPPRGVLVIRTPRGPDGTKG 455
KE +LS P + P + P P P+G + + P+GP G KG
Sbjct: 146 KEGSILSSALPPSEPCIICP-PGPQGAVGQQGPKGPPGPKG 185
>Z73105-4|CAA97443.2| 1406|Caenorhabditis elegans Hypothetical protein
T11G6.5 protein.
Length = 1406
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 231 IIDDKLTRLQDKLQANNLNDSQTNNKKNGENAKSKERKVLSRLPPGATPAGVFPSPPPR- 407
I D+++ + D L S + +K++GE A E + LP ++ + + SPPP
Sbjct: 1084 ISDEQVKQSWDNLMKKKPTASPSIDKEDGEWASDDESRERKNLPSTSSSSVIILSPPPHP 1143
Query: 408 GVLVIRTPRGPDG 446
I+ P P G
Sbjct: 1144 SQKKIQPPVAPPG 1156
>Z69384-10|CAA93420.2| 1406|Caenorhabditis elegans Hypothetical
protein T11G6.5 protein.
Length = 1406
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +3
Query: 231 IIDDKLTRLQDKLQANNLNDSQTNNKKNGENAKSKERKVLSRLPPGATPAGVFPSPPPR- 407
I D+++ + D L S + +K++GE A E + LP ++ + + SPPP
Sbjct: 1084 ISDEQVKQSWDNLMKKKPTASPSIDKEDGEWASDDESRERKNLPSTSSSSVIILSPPPHP 1143
Query: 408 GVLVIRTPRGPDG 446
I+ P P G
Sbjct: 1144 SQKKIQPPVAPPG 1156
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/93 (23%), Positives = 41/93 (44%)
Frame = +3
Query: 120 QLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQT 299
QL+G++ R +++ K+ E + E + + + ++ QA + +T
Sbjct: 191 QLSGDSALRVTAKEKKKTKKTEIVVKEVKEEKKKDTGSVSEDENDIK-AFQAEKSKEIET 249
Query: 300 NNKKNGENAKSKERKVLSRLPPGATPAGVFPSP 398
KKN E K +E + +PPG TP +P
Sbjct: 250 --KKNEEMEKKQEEPKVKPVPPGTTPDTTTTTP 280
>Z83246-3|CAB05843.2| 292|Caenorhabditis elegans Hypothetical
protein ZK795.2 protein.
Length = 292
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +3
Query: 18 THYRESLRFESTWRPRMKLTYVKVGKIWMKLLVGQLNGENRARPVKTLEQ-RQKEYEQAR 194
T RE R + + L + + + + + +G L+ N A+ K LEQ +QK++EQ
Sbjct: 177 TAEREEKRNRRILKAIIALMGLALCSLLVIMFMGSLSRYNEAKKQKELEQEKQKKHEQKT 236
Query: 195 LRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTNNKKNGENAKSKER 341
+A PE + +K Q + ++ K E ++ E+
Sbjct: 237 AEKSEKAVKPEASEKSVKSEKSEKPQKAGEKEPLIDSSKKSEKSEKSEK 285
>U97550-1|AAK18983.2| 1065|Caenorhabditis elegans Hypothetical
protein T20F7.5 protein.
Length = 1065
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 285 NDSQTNNKKNGENAKSKERKVLSRL-PPGATPAGVF-PSPPPR 407
N + N NG + +++ R P G+ P F P PPPR
Sbjct: 53 NQNTNRNNGNGSHFRNQNNNTFGRFYPQGSVPVASFYPPPPPR 95
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 219 SPEDIIDDKLTRLQDKLQANNLNDSQTNNKKNGENAKSKE 338
S E I ++ ++ ++A ND NKKN E+AK K+
Sbjct: 202 SGEKITPEEEEVEEEDVEAKGDNDKNDKNKKNNEDAKKKD 241
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 469 YLFRKPLVPSGPRGVRITSTPRG--GGDGNTPAGVAPG 362
+ F P P+GP G + P G G DGNTP+G G
Sbjct: 171 FCFDCPPGPAGPAGGPGPAGPPGPAGADGNTPSGGGEG 208
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical protein
F48F5.1 protein.
Length = 1291
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +3
Query: 132 ENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQ----- 296
E AR + EQR + A + E + ++D++ R +D+LQA D +
Sbjct: 800 EMEARQAEENEQRIAAEKNALEAKIKEKSNMRKVVDEQNQREKDELQAKLRADQEKSEAR 859
Query: 297 --TNNKKNGENAKSKERKV 347
KK+ +N K KE K+
Sbjct: 860 KIAEKKKDEQNQKEKEAKL 878
>Z68337-7|CAA92742.1| 220|Caenorhabditis elegans Hypothetical
protein M7.10 protein.
Length = 220
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -3
Query: 568 IFST*NQTNRKQVLTRNILCQSWKLIITVLKYCYLFRKPLVPSGPRGVRITSTPRGGGDG 389
I S +QT + Q L + + + VL++ ++ P GP G+R P+G
Sbjct: 132 ILSNKDQTRKAQHEALIALRKEFPIEFDVLRFISSPKRD--PKGPGGLRRPKGPKGPKGP 189
Query: 388 NTPAGVAPGGSR 353
P G PGG +
Sbjct: 190 GGPHGKPPGGPK 201
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 120 QLNGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDD-KLTRLQDKLQANNLND 290
QL E KTL +R E E+ + +GE D +D+ K ++ D Q L +
Sbjct: 1151 QLETEATMCDAKTLVRRMNEVEKMMMSRIGEVDQLRDFLDNLKASKTSDTFQTTELEN 1208
>Z78418-5|CAB01694.2| 361|Caenorhabditis elegans Hypothetical
protein F25D7.2 protein.
Length = 361
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 270 QANNLNDSQTNNKKNGENAKSKERKVLSRLPPGATPAGVF-PSPPPRGVLV 419
QANN + NN NGEN P + A V P+P P G+ V
Sbjct: 285 QANN-QEPHVNNNNNGENDGDNTAPTTEGETPATSDAPVEPPAPQPTGMQV 334
>L15314-3|AAF99986.2| 393|Caenorhabditis elegans Gtp exchange
factor for arfs protein1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 60 PRMKLTYVKVGKIWMKLLVGQLNGENRARPVKTLEQRQKEYE 185
P+ ++K G+ K +G++ G+NR ++TL++ KE++
Sbjct: 92 PQALALWMKAGEGLSKSAIGEILGDNRPFALETLDRFTKEHK 133
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +3
Query: 126 NGENRARPVKTLEQRQKEYEQARLRILGEARSPEDIIDDKLTRLQDKLQANNLNDSQTNN 305
NGE +RP+ T + + +EQ R+ G + + + + + K+ + S +N
Sbjct: 155 NGELHSRPLTTDHKPESVHEQLRIAKAGGETAVKSGVTRVVWKRPQKMSQFMMMTSNSNE 214
Query: 306 KKNGENAKSKE 338
+K+ +N + E
Sbjct: 215 QKHHQNPQIME 225
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,708,869
Number of Sequences: 27780
Number of extensions: 396462
Number of successful extensions: 1580
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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