Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F10
(930 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 82 2e-14
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 79 2e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 59 1e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 57 7e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 44 0.006
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 41 0.052
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.052
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.091
UniRef50_UPI00006D02D6 Cluster: hypothetical protein TTHERM_0094... 35 3.4
UniRef50_Q69XT0 Cluster: Putative uncharacterized protein P0613F... 35 3.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.0
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 6.0
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 6.0
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 82.2 bits (194), Expect = 2e-14
Identities = 48/69 (69%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = +1
Query: 562 RFSIGSAPLTSITKIDAQVRGGETRQDYKRYQGVFPXGSSLRCALLVPTLPPYRIP--VP 735
RFSIGSAPLTSITKIDAQVRGGETRQDYK + FP + CALL P R+P P
Sbjct: 15 RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR-FPL-EAPSCALL---FRPCRLPDTCP 69
Query: 736 PFSLREAWR 762
PFSLREAWR
Sbjct: 70 PFSLREAWR 78
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 78.6 bits (185), Expect = 2e-13
Identities = 42/60 (70%), Positives = 43/60 (71%)
Frame = -2
Query: 596 MLVRGAEPMEKRQQTRPFYGSWPFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 417
MLVRGAEPMEKR + P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLL----PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 59.3 bits (137), Expect = 1e-07
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = +1
Query: 562 RFSIGSAPLTSITKIDAQVRGGETRQDYKRYQGVFPXGSSLRCALL 699
RFSIGSAPLTSITK DAQ+ GGETRQDYK + FP + CALL
Sbjct: 51 RFSIGSAPLTSITKSDAQISGGETRQDYKDTRR-FPLAAP-SCALL 94
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 330 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 497
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 56.8 bits (131), Expect = 7e-07
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = +1
Query: 562 RFSIGSAPLTSITKIDAQVRGGETRQDYKRYQGVFPXGSSLRCALLVPTLPPYRIPV 732
RFSIGSAPLTSI K DAQ+ GGETRQDYK + FP + CALL P+ +PV
Sbjct: 83 RFSIGSAPLTSIAKSDAQISGGETRQDYKDPRR-FPLVAP-SCALL---FLPFGLPV 134
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3
Query: 354 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 452
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 133 DPDMIRYIDEFGQTTTRMQ 189
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 449 HSKAVIRLSTESGDNAGKNM 508
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 44.0 bits (99), Expect = 0.006
Identities = 26/52 (50%), Positives = 29/52 (55%)
Frame = -3
Query: 787 TXGVSYEKAATLPEGRKAEQVSGKAAGSEQGERXEGSFXGGKRPGIFYSPVG 632
T VSYEKA P+G+KAEQVSGK G + R G K P SPVG
Sbjct: 45 TSSVSYEKAPRFPKGKKAEQVSGKRQG--RNRRAHEGAAGEKSPASL-SPVG 93
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 40.7 bits (91), Expect = 0.052
Identities = 27/54 (50%), Positives = 29/54 (53%)
Frame = +1
Query: 616 VRGGETRQDYKRYQGVFPXGSSLRCALLVPTLPPYRIPVPPFSLREAWRLSHSS 777
VR GETRQD K + SL AL RIPVPPFSL + LSHSS
Sbjct: 23 VRSGETRQDLKI---ITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.052
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 328 SALMNRPTRGERRFAYW 378
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.091
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 400 ERGSGRAPNTQTASPRALADSLMQ 329
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00006D02D6 Cluster: hypothetical protein
TTHERM_00947600; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00947600 - Tetrahymena
thermophila SB210
Length = 534
Score = 34.7 bits (76), Expect = 3.4
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 480 NQGITQERTCEQKASKRPGTVKRPRLLAFFHRLRPPDEHHKNRRSSQRWRNPTG 641
+Q I E + + S R K P+L F + L PPDE +K++ Q R P G
Sbjct: 109 SQIINNENIQQNRESIRLSRKKIPQLQPFIYGLDPPDEKNKHKEFRQAQRLPNG 162
>UniRef50_Q69XT0 Cluster: Putative uncharacterized protein
P0613F06.39; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0613F06.39 - Oryza sativa subsp. japonica (Rice)
Length = 309
Score = 34.7 bits (76), Expect = 3.4
Identities = 28/82 (34%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +3
Query: 501 RTCEQKASKRPGTVKRPRLLAFFHRLRPPDEHHKNRRSSQRWRNPTGL*KIPGRFPP--W 674
RT Q S+R G +RP L R RPP RR + R R P+ + PP W
Sbjct: 198 RTAFQPPSRRAGR-RRPAALPPRGRRRPPPSRRARRRPAFRPRAPSSSRRHAATAPPAAW 256
Query: 675 KLPSXR-SPCSDPAALPDTCSA 737
P+ P PA P T A
Sbjct: 257 VSPATAPPPHGPPATAPPTVRA 278
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 539 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 417
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 6.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 211 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 378
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 6.0
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -1
Query: 291 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 127
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,069,950
Number of Sequences: 1657284
Number of extensions: 14851831
Number of successful extensions: 41393
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 39426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41375
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85670899699
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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