Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F10
         (930 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203...    29   5.3  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   7.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342...    28   9.2  

>07_01_0276 +
           2028983-2029070,2030084-2030151,2030317-2031246,
           2031334-2031415,2031544-2031609,2032606-2033304,
           2033422-2035424,2035599-2036173,2037060-2037223,
           2037306-2037365,2037475-2037839
          Length = 1699

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 543 KRPRLLAFFHRLRPPDEHHKNRRSSQRWRNPTGL*KIPGRFPP 671
           + P     ++R R  D+ H + R  +RW + +    + GR PP
Sbjct: 103 REPNSAPRWNRWRETDKEHGDTRKLERWSDDSSKYSVDGRRPP 145


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +3

Query: 387 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 542
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 336 NESAN---ARGEAVCVLGALPLPRSLTRCAR 419
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>05_03_0634 +
           16432679-16433076,16433358-16433610,16433993-16434291,
           16434553-16434729,16435001-16435621,16435690-16435784,
           16436000-16436088,16436185-16436250,16436475-16437026,
           16437879-16437953,16438305-16438375,16438456-16438513,
           16441506-16442048
          Length = 1098

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 537 TVKRPRLLAFFHRLRPPDEHHKNRRSSQRWRNPTGL*KI 653
           T KR R       +  P  H+K + +S  W +P+G+ K+
Sbjct: 355 TNKRDRQAVLDKEISAPKSHNKLQANSDDWEHPSGMTKL 393


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,257,508
Number of Sequences: 37544
Number of extensions: 450769
Number of successful extensions: 1354
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)