Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F10
         (930 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    32   0.62 
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    32   0.62 
At5g07390.1 68418.m00846 respiratory burst oxidase protein A (Rb...    29   4.4  
At5g45050.2 68418.m05524 disease resistance protein-related simi...    29   5.8  
At5g45050.1 68418.m05523 disease resistance protein-related simi...    29   5.8  
At3g20830.1 68416.m02634 protein kinase family protein contains ...    28   7.7  

>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 771 MRKPPRFPKGERRNRYPVRRQGRNKESA 688
           +R PPR     RR+R P+RR GR++ S+
Sbjct: 314 LRSPPRRSPIRRRSRSPIRRPGRSRSSS 341


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 771 MRKPPRFPKGERRNRYPVRRQGRNKESA 688
           +R PPR     RR+R P+RR GR++ S+
Sbjct: 321 LRSPPRRSPIRRRSRSPIRRPGRSRSSS 348


>At5g07390.1 68418.m00846 respiratory burst oxidase protein A
           (RbohA) / NADPH oxidase identical to respiratory burst
           oxidase protein A from Arabidopsis thaliana [gi:3242781]
          Length = 902

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +3

Query: 579 RPPDEHHKNRRSSQRW 626
           RPPDEH  NR  S+ W
Sbjct: 667 RPPDEHRLNRADSKHW 682


>At5g45050.2 68418.m05524 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1344

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 387  PLPRSLTRCARSFGCGERYQLTQRR 461
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1169 PYPRSYYRCASSKGCFARKQVERSR 1193


>At5g45050.1 68418.m05523 disease resistance protein-related similar
            to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
            profiles PF03106: WRKY DNA -binding domain, PF00931:
            NB-ARC domain, PF00560: Leucine Rich Repeat
          Length = 1372

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 387  PLPRSLTRCARSFGCGERYQLTQRR 461
            P PRS  RCA S GC  R Q+ + R
Sbjct: 1197 PYPRSYYRCASSKGCFARKQVERSR 1221


>At3g20830.1 68416.m02634 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 408

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 378 PIRKPPLPARWPIH*CRKNLPHL 310
           P   PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,860,346
Number of Sequences: 28952
Number of extensions: 326643
Number of successful extensions: 909
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2217402144
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)