Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F09
(927 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 29 0.93
SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.6
SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr 1|||Ma... 26 6.6
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 8.7
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 8.7
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 8.7
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 26 8.7
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 8.7
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 8.7
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 8.7
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 8.7
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 8.7
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 8.7
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 8.7
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 8.7
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 320 KSAGAGALRCALNERCLPPNLRCDGNPDCPDGSDEAG 430
K G +C +++ + N D DCPDGSDE G
Sbjct: 39 KPDAKGNWKCLGSDKLISFNQVNDDYCDCPDGSDEPG 75
>SPAC3H8.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1073
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 325 ALAVRTFALISCVGAIRNTITCPPRQS*PL*ITMTIWLWSTRSDPEI-VWKSSTVE 161
+L+ + FA +S G I +TI PP++S +T + S+P I V++ S E
Sbjct: 154 SLSKQVFAQLSIDGIILHTIFVPPKRSSSSCVTYVCLFLDSNSNPRINVYRWSKTE 209
>SPAC22F3.13 |tsc1||hamartin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 273 FLIAPTQL--MSANVRTARARGPAPYDVPLTSDVYLPIYVATEIRTAP 410
FL PT++ +S V R +GP Y++P T Y + E T+P
Sbjct: 198 FLNPPTRIPILSVMVEVIRRQGPRLYEIPQTG-FYDLVLKCAEFDTSP 244
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = -2
Query: 308 IRAHQLRRRNQEYYHMPAATKLAVVNHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEH 129
++ HQL++ + + + +LA ++ NLV +R+SL +H + E+
Sbjct: 538 VQLHQLKKYVTYFSQIWSTDELADISETKNLVGHDTKTNRSSLSSKHEVDLF----TAEN 593
Query: 128 RSLREKL 108
+ REKL
Sbjct: 594 EAAREKL 600
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 233 NHYDNLVVEHKIRSRNSLEIEHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDYLRNEAV 54
N D + K+ S+ +++ H+R +L + R L+E+ +S+ ++D+L ++
Sbjct: 135 NQLDKVQFIRKLMSKANVDDFHTRLFILWMLPYSLRKLKERNYWKSEISEIYDFLEDKRT 194
Query: 53 A 51
A
Sbjct: 195 A 195
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,288,350
Number of Sequences: 5004
Number of extensions: 45341
Number of successful extensions: 147
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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