Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F09
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0420 + 9051728-9051754,9053244-9053530,9055263-9055500,905...    34   0.14 
12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,573...    31   0.98 
11_06_0758 + 27005871-27006317                                         31   1.7  
07_01_0709 + 5346074-5346377,5347820-5347918,5348179-5348265,534...    28   9.2  
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535...    28   9.2  

>09_02_0420 +
           9051728-9051754,9053244-9053530,9055263-9055500,
           9057010-9057204,9058075-9058339,9058520-9058827
          Length = 439

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -2

Query: 392 RRNVNWEVDIAR*GHIVGRRPPRSCSTHIRAHQLRRRNQEYYHMPAATK 246
           RR V W       GH  GR+PP S  +  RA Q RRR  + + +P   K
Sbjct: 308 RRWVEWRRRRRATGHPKGRQPPGSSGSGARARQHRRRLDDGHFVPLLAK 356


>12_01_0672 +
           5731288-5731356,5732032-5732117,5732634-5732724,
           5732886-5732935,5733339-5733408,5733508-5733617,
           5733943-5734463,5734856-5734949,5735095-5735225,
           5735241-5736274,5736383-5736457,5736615-5737104,
           5737375-5738009,5738166-5738378
          Length = 1222

 Score = 31.5 bits (68), Expect = 0.98
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
 Frame = -2

Query: 224 DNLVVEHKIRSRNSLEI-EHSRSVLLVVQVGEHRSLREKLDSRSDTVALHDY-------L 69
           D   ++     R S+ + +   + L+V  VG H  +R+ L +    +  + Y       L
Sbjct: 167 DRTTIDASFSGRVSVSVADEGETALVVSMVGVHSEIRDGLKTEQKGLNSNSYPSYSKDDL 226

Query: 68  RNEAVAFSKILRNS 27
            NE VA +KILRNS
Sbjct: 227 LNETVADAKILRNS 240


>11_06_0758 + 27005871-27006317
          Length = 148

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 488 LGAVRNRAGYALWAERGRYGKICAAP 565
           +G  RNRAG     ERGRYG +C  P
Sbjct: 1   MGMRRNRAGGGGSGERGRYGFLCFQP 26


>07_01_0709 +
           5346074-5346377,5347820-5347918,5348179-5348265,
           5349012-5349038,5349847-5350013
          Length = 227

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 131 ARLPERLKAHFDCARF-PDYFGIGSCAPQPDCHSDLQRLALSRRAC 265
           A   ++L A   C  F  D    G+ AP PDC S L+ +  + R C
Sbjct: 17  AECADKLMALSTCLTFVQDGASGGAAAPTPDCCSGLKAVLAASRKC 62


>04_04_1122 +
           31052497-31052629,31053133-31053191,31053285-31053579,
           31054099-31054279,31054739-31054956,31055522-31055739,
           31055842-31055958,31056106-31056128,31056223-31056438,
           31056536-31056677,31056822-31057067,31057659-31057856,
           31058331-31058379,31060835-31060911,31061266-31061551,
           31061661-31061841,31062149-31062344,31062630-31062738,
           31062861-31062961,31063155-31063267,31063347-31063442,
           31063531-31063746,31063857-31063995,31064087-31064332,
           31064605-31064940
          Length = 1396

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 8/29 (27%), Positives = 20/29 (68%)
 Frame = -2

Query: 290 RRRNQEYYHMPAATKLAVVNHYDNLVVEH 204
           +R+N  +++ P+ T   +VNHY++  +++
Sbjct: 913 QRKNGSFFNCPSTTAATLVNHYNDKALQY 941


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,242,077
Number of Sequences: 37544
Number of extensions: 362142
Number of successful extensions: 917
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)