Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F07
         (938 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    61   3e-08
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    54   7e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    46   0.001
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    43   0.013
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    40   0.069

>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 61.3 bits (142), Expect = 3e-08
 Identities = 31/37 (83%), Positives = 31/37 (83%)
 Frame = +2

Query: 446 LTDSLXXVVRLRXAVSAHSKAVIRXSTXSGDNXGKNM 556
           LTDSL  VVRLR AVSAHSKAVIR ST SGDN GKNM
Sbjct: 23  LTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 53.6 bits (123), Expect = 7e-06
 Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = +3

Query: 357 EVWEVFXXXNESANXRGXA-VCXLGALPXPRSLTRCXRSFGCGXRYQLTQRR*YGXPXNQ 533
           ++ EV     E    R  + +C  G +P PRSLTR  RSFGCG RY+LT           
Sbjct: 10  KISEVLHVAGEKRQHRRVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GD 61

Query: 534 GITQEKTCXQKAXKRPGTVKRPRCWRFSIGSAPL 635
           G   E T  +K   +     RPR  RFSIGSAPL
Sbjct: 62  GNFLEDT--RKTLSKEEI--RPRRSRFSIGSAPL 91


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 46.4 bits (105), Expect = 0.001
 Identities = 21/32 (65%), Positives = 21/32 (65%)
 Frame = -1

Query: 578 PFXGLLXTCFFLXYPLIXWXTVLPPLSELIPL 483
           P    L TC F  YPLI W TVLPPLSEL PL
Sbjct: 19  PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 42.7 bits (96), Expect = 0.013
 Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 387 ESANXRGXAVCXLGALPXPRSLTRCXRSFGCGXRYQL-TQRR*YGXPXNQGITQ 545
           + A  R  AV  L ALP  RS TRC RS GCG      +  R YG P  QG+ Q
Sbjct: 269 DPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322


>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 40.3 bits (90), Expect = 0.069
 Identities = 20/28 (71%), Positives = 21/28 (75%)
 Frame = +1

Query: 637 TSITKIDXQVRGGETRQGL*RYQAFPLE 720
           TSITKID QVRGGETRQ     + FPLE
Sbjct: 24  TSITKIDAQVRGGETRQDYKDTRRFPLE 51


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,418,203
Number of Sequences: 1657284
Number of extensions: 7349962
Number of successful extensions: 19170
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18500
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)