Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F07
         (938 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0931 - 21647562-21649037                                         30   3.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.3  
02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058     29   7.1  
02_04_0170 + 20576149-20576889                                         29   7.1  
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184...    28   9.3  

>10_08_0931 - 21647562-21649037
          Length = 491

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 632 PXRASQKSTLKSE-VAKPDRDYKDTRRSPWK 721
           P R S  S+L  E +AK   DY   RRSP+K
Sbjct: 239 PKRLSPASSLSKETLAKASEDYSSRRRSPYK 269


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 414 PPXPGXWPIH*XXXKPPTPPPXPXTXN 334
           PP P   P H     PP PPP P   N
Sbjct: 621 PPPPPPLPNHSVLPPPPPPPPPPSLPN 647


>02_04_0171 + 20581995-20582354,20582509-20583141,20584954-20585058
          Length = 365

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 414 PPXPGXWPIH*XXXKPPTPPP 352
           PP  G WP+      PP PPP
Sbjct: 231 PPQAGTWPLPAPAAMPPPPPP 251


>02_04_0170 + 20576149-20576889
          Length = 246

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 414 PPXPGXWPIH*XXXKPPTPPP 352
           PP  G WP+      PP PPP
Sbjct: 112 PPQAGTWPLPAPAAMPPPPPP 132


>04_01_0162 +
           1845295-1846317,1846430-1846565,1848436-1848626,
           1848780-1848887,1849001-1849204,1849294-1849525,
           1849602-1849751,1849830-1850007,1850416-1850519,
           1850611-1850933,1851274-1851459,1851672-1851899
          Length = 1020

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 669 RWRNPTGTIKIPGVPPGSXSCASCXTCR 752
           RW  P G +++P +  GS     C  CR
Sbjct: 333 RWHLPLGAVEVPVINFGSAGVIRCRRCR 360


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,245,331
Number of Sequences: 37544
Number of extensions: 237935
Number of successful extensions: 894
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)