Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F06
(909 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 49 5e-08
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 45 1e-06
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 45 1e-06
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 41 1e-05
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 33 0.004
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 25 0.72
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 2.9
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 3.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 5.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 5.1
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 6/100 (6%)
Frame = +3
Query: 135 PVSTRILSAPPTLTAGAELSLPCEVDGYPQPENVYWSKDGVRIAS------GDNIWISGT 296
P R A TL G + L C G P PE + W DG R+++ G + ++G
Sbjct: 393 PPQIRQAFAEETLQPGPSMFLKCVASGNPTPE-ITWELDGKRLSNTERLQVGQYVTVNGD 451
Query: 297 SVSRLTIRRVTVGDSGVYVCHADNLYSSHESSVQVTVKAL 416
VS L I D G+Y C A + S E S ++ V L
Sbjct: 452 VVSHLNISSTHTNDGGLYKCIAASKVGSAEHSARLNVYGL 491
Score = 38.3 bits (85), Expect = 1e-04
Identities = 25/82 (30%), Positives = 36/82 (43%)
Frame = +3
Query: 168 TLTAGAELSLPCEVDGYPQPENVYWSKDGVRIASGDNIWISGTSVSRLTIRRVTVGDSGV 347
T T ++ LPC G P PE V W G + S D + L I+ V D+G
Sbjct: 1287 TATYKEDVKLPCLAVGVPAPE-VTWKVRGAVLQSSDRL--RQLPEGSLFIKEVDRTDAGE 1343
Query: 348 YVCHADNLYSSHESSVQVTVKA 413
Y C+ +N + + Q+ V A
Sbjct: 1344 YSCYVENTFGHDTVTHQLIVHA 1365
Score = 37.9 bits (84), Expect = 1e-04
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +3
Query: 171 LTAGAELSLPCEVDGYPQPENVYWSKDGVRIASGDNIWISGTS--VSRLTIRRVTVGDSG 344
+ AG +L C V P N+ WS G + + + VS L I +T +G
Sbjct: 595 MNAGEFANLQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAG 654
Query: 345 VYVCHADNLYSSHESSVQVTV 407
YVC A+N + S +TV
Sbjct: 655 EYVCTAENAAGTASHSTTLTV 675
Score = 31.9 bits (69), Expect = 0.008
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 180 GAELSLPCEVDGYPQPENVYWSK-DGVRIASGDNIWISGTSVS----RLTIRRVTVGDSG 344
G++ + C+ DG+P+P+ V W K G ++ +S +S L+I + + G
Sbjct: 693 GSDARVECKADGFPKPQ-VTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNEG 751
Query: 345 VYVCHADN 368
Y+C A N
Sbjct: 752 YYLCEAVN 759
Score = 30.7 bits (66), Expect = 0.019
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +3
Query: 171 LTAGAELSLPCEVDGYPQPENVYWSKDG--VRIASGDNIWISGTSVSRLTIRRVTVGDSG 344
+ AG L + C V GYP E++ W +D + I ++ +GT + + R++ D
Sbjct: 502 IVAGETLRVTCPVAGYP-IESIVWERDTRVLPINRKQKVFPNGTLIIE-NVERMS--DQA 557
Query: 345 VYVCHADNL--YSSHES-SVQVTV 407
Y C A N YS+ + VQV V
Sbjct: 558 TYTCVARNAQGYSARGTLEVQVMV 581
Score = 29.5 bits (63), Expect = 0.044
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = +3
Query: 183 AELSLPCEVDGYPQPENVYW-----SKDGVRIASGDNI-WISGTSVSRLTIRRVTVGDSG 344
A+L L C G+P P + ++ S + + + +SGT L IR V DSG
Sbjct: 228 ADLPLLCPAQGFPVPVHRWYKFIEGSSRRQPVQLNERVRQVSGT----LIIREARVEDSG 283
Query: 345 VYVCHADNLYSSHESSVQVTVKA 413
Y+C +N +TV A
Sbjct: 284 KYLCIVNNSVGGESVETVLTVTA 306
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 44.8 bits (101), Expect = 1e-06
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = +3
Query: 126 GQAPVSTRILSAPPTLTAGAELSLPCEVDGYPQPENVYWSKDGV------RIASGDNIWI 287
G AP TL G +SL C G P P+ V W+ DG R G + +
Sbjct: 418 GNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQ-VTWALDGFALPTNGRFMIGQYVTV 476
Query: 288 SGTSVSRLTIRRVTVGDSGVYVCHADN 368
G +S + I V V D G Y C A+N
Sbjct: 477 HGDVISHVNISHVMVEDGGEYSCMAEN 503
Score = 41.9 bits (94), Expect = 8e-06
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +3
Query: 168 TLTAGAELSLPCEVDGYPQPENVYWSKDG-VRIASGDNIWISGTS-------VSRLTIRR 323
T+ G +L CEV G P V W K G + + N ++ +++L I
Sbjct: 818 TVKKGDTATLHCEVHG-DTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISS 876
Query: 324 VTVGDSGVYVCHADNLYSSHESSVQVTVKALTTPAKCTDNPFFADCSLIVR 476
DSG Y C A NLY + VQ+ V+ P + A S+ V+
Sbjct: 877 AEASDSGAYFCQASNLYGRDQQLVQLLVQEPPQPPNSLETAMVASRSINVK 927
Score = 33.5 bits (73), Expect = 0.003
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 192 SLPCEVDGYPQPENVYWSKDG---VRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCHA 362
SL C P PE ++++ G + + SG + G S L + VT+ D+G+Y C A
Sbjct: 256 SLVCVAQACPTPEYRWYAQTGSEPMLVLSGPRTRLLG---SVLALEAVTLEDNGIYRCSA 312
Query: 363 DNLYSSHESSVQVTVKA 413
N + +++ V A
Sbjct: 313 SNPGGEASAEIRLIVTA 329
Score = 33.5 bits (73), Expect = 0.003
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +3
Query: 168 TLTAGAELSLPCEVDGYPQPENVYWSKDGVRIASG--DNIWISGTSVSRLTIRRVTVGDS 341
T AG L L C V GYP E + W + + + GT V ++ GD+
Sbjct: 529 TAVAGETLRLKCPVAGYP-IEEIKWERANRELPDDLRQKVLPDGTLVITSVQKK---GDA 584
Query: 342 GVYVCHADN 368
GVY C A N
Sbjct: 585 GVYTCSARN 593
Score = 24.2 bits (50), Expect = 1.7
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +3
Query: 192 SLPCEVDGYPQPENVYWSKDGVRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCHADNL 371
+L C G P E + +R S NI I + L + + D G Y C +N
Sbjct: 1332 TLACNAVGDPTREWYKGQGEQIRTDSTRNIQILPSG--ELMLSNLQSQDGGDYTCQVENA 1389
Query: 372 YSSHESSVQVTVK 410
+ + +TV+
Sbjct: 1390 QGNDKLHYTLTVQ 1402
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 44.8 bits (101), Expect = 1e-06
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = +3
Query: 126 GQAPVSTRILSAPPTLTAGAELSLPCEVDGYPQPENVYWSKDGV------RIASGDNIWI 287
G AP TL G +SL C G P P+ V W+ DG R G + +
Sbjct: 418 GNAPPMLLYSFIEQTLQPGPAVSLKCSAAGNPTPQ-VTWALDGFALPTNGRFMIGQYVTV 476
Query: 288 SGTSVSRLTIRRVTVGDSGVYVCHADN 368
G +S + I V V D G Y C A+N
Sbjct: 477 HGDVISHVNISHVMVEDGGEYSCMAEN 503
Score = 41.9 bits (94), Expect = 8e-06
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +3
Query: 168 TLTAGAELSLPCEVDGYPQPENVYWSKDG-VRIASGDNIWISGTS-------VSRLTIRR 323
T+ G +L CEV G P V W K G + + N ++ +++L I
Sbjct: 814 TVKKGDTATLHCEVHG-DTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIAQLQISS 872
Query: 324 VTVGDSGVYVCHADNLYSSHESSVQVTVKALTTPAKCTDNPFFADCSLIVR 476
DSG Y C A NLY + VQ+ V+ P + A S+ V+
Sbjct: 873 AEASDSGAYFCQASNLYGRDQQLVQLLVQEPPQPPNSLETAMVASRSINVK 923
Score = 35.5 bits (78), Expect = 7e-04
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +3
Query: 168 TLTAGAELSLPCEVDGYPQPENVYWSKDGVRIASG--DNIWISGTSVSRLTIRRVTVGDS 341
T AG L L C V GYP E + W + + + GT V ++ GD+
Sbjct: 529 TAVAGETLRLKCPVAGYP-IEEIKWERANRELPDDLRQKVLPDGTLVITSVQKK---GDA 584
Query: 342 GVYVCHADNLYSSHESSVQVTVKALTTPAKCTDNPFFADCSL 467
GVY C A N H + V A+ P K +PF AD L
Sbjct: 585 GVYTCSARN-KQGHSARRSGDV-AVIVPPKI--SPFTADRDL 622
Score = 33.5 bits (73), Expect = 0.003
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +3
Query: 192 SLPCEVDGYPQPENVYWSKDG---VRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCHA 362
SL C P PE ++++ G + + SG + G S L + VT+ D+G+Y C A
Sbjct: 256 SLVCVAQACPTPEYRWYAQTGSEPMLVLSGPRTRLLG---SVLALEAVTLEDNGIYRCSA 312
Query: 363 DNLYSSHESSVQVTVKA 413
N + +++ V A
Sbjct: 313 SNPGGEASAEIRLIVTA 329
Score = 31.1 bits (67), Expect = 0.014
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Frame = +3
Query: 156 SAPPTLTAGAELSLPCEVDGYPQPENVYWSKDGVRIASGDNIWISGTSV--SRLTIRRVT 329
+A L G +L C V P ++ W KDG + + + ++ S L I ++
Sbjct: 617 TADRDLHLGERTTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLS 676
Query: 330 VGDSGVYVCHADNLYS--SHESSVQVTV 407
+G Y C A NL + SH + V V
Sbjct: 677 PDHNGNYSCVARNLAAEVSHTQRLVVHV 704
Score = 24.2 bits (50), Expect = 1.7
Identities = 18/73 (24%), Positives = 29/73 (39%)
Frame = +3
Query: 192 SLPCEVDGYPQPENVYWSKDGVRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCHADNL 371
+L C G P E + +R S NI I + L + + D G Y C +N
Sbjct: 1328 TLACNAVGDPTREWYKGQGEQIRTDSTRNIQILPSG--ELMLSNLQSQDGGDYTCQVENA 1385
Query: 372 YSSHESSVQVTVK 410
+ + +TV+
Sbjct: 1386 QGNDKLHYTLTVQ 1398
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 41.1 bits (92), Expect = 1e-05
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +3
Query: 180 GAELSLPCEVDGYPQPENVYWSKDGVRIASGD----NIWISG--TSVSRLTIRRVTVGDS 341
G +++ C G+P+PE + W KDG+ + + W G T S++ I T D+
Sbjct: 37 GRKITFFCMATGFPRPE-ITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDA 95
Query: 342 GVYVCHADNLYS 377
G Y C ADN Y+
Sbjct: 96 GYYECQADNQYA 107
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 33.1 bits (72), Expect = 0.004
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +3
Query: 186 ELSLPCEVDGYPQPENVYWSK--DGVRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCH 359
E ++ C V G P P V W K + + D + G ++L I+ V D+G Y+C
Sbjct: 418 EANIRCHVAGEPLPR-VQWLKNDEALNHDQPDKYDLIGNG-TKLIIKNVDYADTGAYMCQ 475
Query: 360 ADNLYSSHESSVQVTVKALTTP-AKCTDNPFFA 455
A ++ + V+ TP + + FF+
Sbjct: 476 ASSIGGITRDISSLVVQEQPTPTTESEERRFFS 508
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +3
Query: 180 GAELSLPCEVDGYPQPENVYWSKDGVRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCH 359
G + + C+V G P P V W ++G + + + I + L + +V + +G Y CH
Sbjct: 325 GDNVEIKCDVTGTPPPPLV-WRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCH 383
Query: 360 A---DNLYSSHESSVQVTVKALTTP 425
A ++ +H ++ + TP
Sbjct: 384 AVRNQDVVQTHVLTIHTIPEVKVTP 408
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 25.4 bits (53), Expect = 0.72
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 697 NYIEKNNQYENNIIVTDGCLLTLTRDDNNSPKNYFLLVK 581
+YIE+NN I D +T+ R N P N +K
Sbjct: 45 DYIEENNMPNGMQIWNDKVFITIPRWKNGVPSNLNFFLK 83
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 250 SLDQYTFSGCGYP 212
SL+++ F GCG+P
Sbjct: 572 SLERFDFCGCGWP 584
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 694 YIEKNNQYENNIIVTDGCLL 635
+I KN++YE N I+T LL
Sbjct: 84 FINKNDKYEENTILTTMPLL 103
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 174 SASGAPTISLSTPALVHSRRPAAALT*PKHNRVTTWLDTGXKSIK 40
+++G TI LS +++HS + A + VTT L T +K
Sbjct: 927 TSAGLQTIRLSGHSVLHSAQSVVASSASNVTNVTTNLTTILPPVK 971
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 5.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 732 GTILLFSAINCVILKELYIRLSYE*HHMSTVC 827
G LL NCV+++E L+ +ST C
Sbjct: 604 GLFLLLDMFNCVVVEETIPSLNSTNVTLSTKC 635
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 5.1
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 180 PRSASGAPTISLSTP 136
P S G P++SLS+P
Sbjct: 124 PESRDGPPSVSLSSP 138
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,622
Number of Sequences: 438
Number of extensions: 5023
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -