Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F04
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   7.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 292 RNPILLPLKSTRTRPSLSSHRNNAKGAAKTPTTTEKSP 405
           RN +   L S    P  S  R+ +K   K+P+  ++SP
Sbjct: 667 RNFLKNALMSNNILPPESPTRDKSKQNEKSPSPQQRSP 704


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 283 CFIRNPILLPLKSTRTRPSLSSHRNNAKGAA-KTPTTTEKSPQSPXLKK 426
           C I+N +LL   ST+    + S++NN      K        P+ P L K
Sbjct: 2   CQIKNKLLLLDSSTQPNYLILSNKNNTYLVLNKYLLVKHSKPKMPLLPK 50


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 54  VYCQTCNQPSFTLCSRLQIT 113
           V+C   +Q S  +  R+Q+T
Sbjct: 298 VFCDCSHQASLNIARRVQVT 317


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 54  VYCQTCNQPSFTLCSRLQIT 113
           V+C   +Q S  +  R+Q+T
Sbjct: 298 VFCDCSHQASLNIARRVQVT 317


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 54  VYCQTCNQPSFTLCSRLQIT 113
           V+C   +Q S  +  R+Q+T
Sbjct: 298 VFCDCSHQASLNIARRVQVT 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,183
Number of Sequences: 336
Number of extensions: 4000
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)