Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F04
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical pr... 37 0.022
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 33 0.20
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81122-12|CAB03359.1| 235|Caenorhabditis elegans Hypothetical p... 31 1.4
U66405-1|AAB48388.1| 235|Caenorhabditis elegans caveolin-1 prot... 31 1.4
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 4.4
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 29 5.8
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 28 7.7
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 7.7
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 28 7.7
Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 28 7.7
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 7.7
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 28 7.7
>Z30423-2|CAA83004.1| 468|Caenorhabditis elegans Hypothetical
protein T20G5.2 protein.
Length = 468
Score = 36.7 bits (81), Expect = 0.022
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 502 NTAVPNSMDDSAPVAGAKIKSG*KEHLDSGTTLQNINLDSIVPGVLTRTGKITET 666
+T + + P AK+KS EH T +QN+N+D I G+ + G +TET
Sbjct: 32 STNLKEVLSKKIPAHNAKVKSFRTEH--GSTVVQNVNIDMIYGGMRSMKGMVTET 84
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 286 FIRNPILLPLKSTRTRPSLSSHRNNAKGAAKTPTTTE-KSPQSPXLKKDTS*RKTPXMVK 462
FI+ PI +PL++ + PS S + + + ++ K + +K +S KTP V+
Sbjct: 136 FIKPPIQIPLEAVVSLPSTSKAVIEDESSLREMLLSQLKQSKKRNAEKSSSQEKTPKRVR 195
Query: 463 YAAGKISGNVL*MNTAVPNSMDDSAPVAGAKIK 561
+ ++S +V + A P ++ PVA ++K
Sbjct: 196 KNSSRLSNSVKNIFEA-PVAISPQVPVAKIEVK 227
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Frame = +1
Query: 286 FIRNPILLPLKSTRTRPSLSSHRNNAKGAAKTPTTTE-KSPQSPXLKKDTS*RKTPXMVK 462
FI+ PI +PL++ + PS S + + + ++ K + +K +S KTP V+
Sbjct: 219 FIKPPIQIPLEAVVSLPSTSKAVIEDESSLREMLLSQLKQSKKRNAEKSSSQEKTPKRVR 278
Query: 463 YAAGKISGNVL*MNTAVPNSMDDSAPVAGAKIK 561
+ ++S +V + A P ++ PVA ++K
Sbjct: 279 KNSSRLSNSVKNIFEA-PVAISPQVPVAKIEVK 310
>Z81122-12|CAB03359.1| 235|Caenorhabditis elegans Hypothetical
protein T13F2.8 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 267 IFQLNHVVFLAIKVF*NQCFCLLGLPFS 184
+++LNH VF A+++F + LL LPF+
Sbjct: 134 VWRLNHTVFTAVRLFIYRLVSLLALPFT 161
>U66405-1|AAB48388.1| 235|Caenorhabditis elegans caveolin-1
protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 267 IFQLNHVVFLAIKVF*NQCFCLLGLPFS 184
+++LNH VF A+++F + LL LPF+
Sbjct: 134 VWRLNHTVFTAVRLFIYRLVSLLALPFT 161
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 313 LKSTRTRPSLSSHRNNAKGAAKTPTTTEKSPQSPXLKKDT 432
+KST T P+ + + TPTT + +P +P K T
Sbjct: 256 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKST 295
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 313 LKSTRTRPSLSSHRNNAKGAAKTPTTTEKSPQSPXLKKDT 432
+KST T P+ + + TPTT + +P +P K T
Sbjct: 370 MKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKST 409
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +1
Query: 334 PSLSSHRNNAKGAAKTPTTTEKSPQSPXLKKDTS*RKTPXMVKYAAGKISGNVL*MNTAV 513
PS SS R+ + ++ TPTTT S S + S R + + + SG V+ ++ A
Sbjct: 976 PSGSSKRDFVQ-SSNTPTTTTHSSSSHRYQHSNSSRGGTPLAQRLRDERSGQVVLLSRAS 1034
Query: 514 PNSMDDSAPVAGAKIK--SG*KEHLDSGTT 597
+ D +P+ + +G H+ + T+
Sbjct: 1035 DSEPDVGSPMTNTRDSDWNGSAAHISTATS 1064
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 874 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 915
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 477 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 518
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 837 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 878
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 349 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 390
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 874 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 915
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 477 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 518
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 837 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 878
>Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical
protein C32C4.7 protein.
Length = 536
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 604 FEELFQNPDVLFIHFLFSRPP--LEQNHPYY 518
F+E N FI+ +F +PP + +HPYY
Sbjct: 205 FQERLMNTVCAFIYQVFMKPPKMISYSHPYY 235
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 349 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 390
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 477 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 518
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 551 APATGAESSILFGTAVFIYSTFPEIFPAAYFTXQGVFRYDVS 426
APA A ++ GTAV +++T E+F +A T G + S
Sbjct: 816 APAPPAYGTLTTGTAVNVHATTVELFASARSTSVGQLAFATS 857
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,510,438
Number of Sequences: 27780
Number of extensions: 354547
Number of successful extensions: 897
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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