BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fdpeP01_F_F04 (880 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 3.7 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.9 AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 4.9 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 23.0 bits (47), Expect = 3.7 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 175 LYTGKW*SKQTKALILKDLYRKKNNM 252 L T KW +K + L DLY KN + Sbjct: 379 LDTKKWNNKISALRALNDLYNVKNTL 404 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.6 bits (46), Expect = 4.9 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +1 Query: 289 IRNPILLPLKSTRTRPSLSSHRNNAKGAAKTPTTTEKSPQ 408 IR L + +++R S R+NA +KT ++K P+ Sbjct: 69 IREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKGPE 108 >AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 22.6 bits (46), Expect = 4.9 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = +1 Query: 289 IRNPILLPLKSTRTRPSLSSHRNNAKGAAKTPTTTEKSPQ 408 IR L + +++R S R+NA +KT ++K P+ Sbjct: 69 IREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKGPE 108 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 206,446 Number of Sequences: 438 Number of extensions: 3918 Number of successful extensions: 10 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 28523595 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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