Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F03
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097411-1|BAC05040.1|  656|Homo sapiens protein ( Homo sapiens ...    31   4.3  
BC065237-1|AAH65237.1|  812|Homo sapiens chromosome 13 open read...    31   7.5  
AL845154-1|CAI23600.1|  812|Homo sapiens chromosome 13 open read...    31   7.5  
AK074894-1|BAC11273.1|  740|Homo sapiens protein ( Homo sapiens ...    31   7.5  
AB058705-1|BAB47431.1|  821|Homo sapiens KIAA1802 protein protein.     31   7.5  

>AK097411-1|BAC05040.1|  656|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40092 fis, clone TESTI2003756. ).
          Length = 656

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASS 298
           S A ++ K   PP  ++S+S+P PA  +    + Q+  +   T  A+S
Sbjct: 28  STAPVSGKKHRPPGPLFSSSDPLPATSYHSRDTAQVTSLIPATFTAAS 75



 Score = 31.5 bits (68), Expect = 4.3
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYSTSEPPPAYRHRVSTSVQIAKIAALTVVASS 298
           S A ++ K   PP  ++S+S+P PA       S Q+  +   T  A+S
Sbjct: 299 STAPVSGKKHRPPGPLFSSSDPLPATSSHSRDSAQVTSLIPATFTAAS 346


>BC065237-1|AAH65237.1|  812|Homo sapiens chromosome 13 open reading
           frame 8 protein.
          Length = 812

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 297 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPTEMMPWLADEP 449
           P  W+P+  +  G      ++S +SW   S   S WK+ P     W +  P
Sbjct: 345 PGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPP 395


>AL845154-1|CAI23600.1|  812|Homo sapiens chromosome 13 open reading
           frame 8 protein.
          Length = 812

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 297 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPTEMMPWLADEP 449
           P  W+P+  +  G      ++S +SW   S   S WK+ P     W +  P
Sbjct: 345 PGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPP 395


>AK074894-1|BAC11273.1|  740|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90413 fis, clone NT2RP3000063, weakly similar to
           NEUROFILAMENT TRIPLET H PROTEIN. ).
          Length = 740

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 297 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPTEMMPWLADEP 449
           P  W+P+  +  G      ++S +SW   S   S WK+ P     W +  P
Sbjct: 273 PGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPP 323


>AB058705-1|BAB47431.1|  821|Homo sapiens KIAA1802 protein protein.
          Length = 821

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 297 PSSWEPLYWLRVG*QLVHHAIS*SSWMQCSTKNSLWKAEPTEMMPWLADEP 449
           P  W+P+  +  G      ++S +SW   S   S WK+ P     W +  P
Sbjct: 354 PGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPP 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,116,364
Number of Sequences: 237096
Number of extensions: 2604390
Number of successful extensions: 6370
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)