Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F03
         (898 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S81027-1|AAB36035.1|  608|Drosophila melanogaster Msr-110 protein.    108   1e-23
AY118587-1|AAM49956.1|  608|Drosophila melanogaster LD44960p pro...   108   1e-23
AE014296-970|AAN12100.1|  608|Drosophila melanogaster CG10596-PB...   108   1e-23
BT001836-1|AAN71591.1|  617|Drosophila melanogaster RH50422p pro...    98   2e-20
AE014296-971|AAF50768.1|  617|Drosophila melanogaster CG10596-PA...    98   2e-20
AE014296-972|AAN12101.1|  625|Drosophila melanogaster CG10596-PC...    71   2e-12

>S81027-1|AAB36035.1|  608|Drosophila melanogaster Msr-110 protein.
          Length = 608

 Score =  108 bits (259), Expect = 1e-23
 Identities = 53/85 (62%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 331
           SMAT+ MKP+Y  SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8   SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66

Query: 332 WVAARSSCHQLEQLDAMLDKELALE 406
           ++ A++SC Q++ LD++L+KEL LE
Sbjct: 67  YLQAKASCDQVQALDSVLEKELMLE 91



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 715 KLPIQFDLDELAGAFLANNQKGRMNCVVERR 807
           K+P++ DL +LA A L NN+K RMNCVVER+
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERK 190


>AY118587-1|AAM49956.1|  608|Drosophila melanogaster LD44960p
           protein.
          Length = 608

 Score =  108 bits (259), Expect = 1e-23
 Identities = 53/85 (62%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 331
           SMAT+ MKP+Y  SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8   SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66

Query: 332 WVAARSSCHQLEQLDAMLDKELALE 406
           ++ A++SC Q++ LD++L+KEL LE
Sbjct: 67  YLQAKASCDQVQALDSVLEKELMLE 91



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 715 KLPIQFDLDELAGAFLANNQKGRMNCVVERR 807
           K+P++ DL +LA A L NN+K RMNCVVER+
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERK 190


>AE014296-970|AAN12100.1|  608|Drosophila melanogaster CG10596-PB,
           isoform B protein.
          Length = 608

 Score =  108 bits (259), Expect = 1e-23
 Identities = 53/85 (62%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYST-SEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 331
           SMAT+ MKP+Y  SEVYST SEPPPAY+ R + SV+IAKI A T++ S+FILG+FILASS
Sbjct: 8   SMATVQMKPDYAASEVYSTASEPPPAYK-RQANSVKIAKITAFTIIVSAFILGSFILASS 66

Query: 332 WVAARSSCHQLEQLDAMLDKELALE 406
           ++ A++SC Q++ LD++L+KEL LE
Sbjct: 67  YLQAKASCDQVQALDSVLEKELMLE 91



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 715 KLPIQFDLDELAGAFLANNQKGRMNCVVERR 807
           K+P++ DL +LA A L NN+K RMNCVVER+
Sbjct: 160 KMPLELDLSDLAAAILRNNKKSRMNCVVERK 190


>BT001836-1|AAN71591.1|  617|Drosophila melanogaster RH50422p
           protein.
          Length = 617

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 9/93 (9%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 307
           SMAT+ MKP+Y  SEVYST SEPPP     + H    R + SV+IAKI A T++ S+FIL
Sbjct: 8   SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67

Query: 308 GTFILASSWVAARSSCHQLEQLDAMLDKELALE 406
           G+FILASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 68  GSFILASSYLQAKASCDQVQALDSVLEKELMLE 100



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 715 KLPIQFDLDELAGAFLANNQKGRMNCVVERR 807
           K+P++ DL +LA A L NN+K RMNCVVER+
Sbjct: 169 KMPLELDLSDLAAAILRNNRKSRMNCVVERK 199


>AE014296-971|AAF50768.1|  617|Drosophila melanogaster CG10596-PA,
           isoform A protein.
          Length = 617

 Score = 97.9 bits (233), Expect = 2e-20
 Identities = 52/93 (55%), Positives = 70/93 (75%), Gaps = 9/93 (9%)
 Frame = +2

Query: 155 SMATITMKPEYPPSEVYST-SEPPPA----YRH----RVSTSVQIAKIAALTVVASSFIL 307
           SMAT+ MKP+Y  SEVYST SEPPP     + H    R + SV+IAKI A T++ S+FIL
Sbjct: 8   SMATVQMKPDYAASEVYSTASEPPPMGFFNFNHQAYKRQANSVKIAKITAFTIIVSAFIL 67

Query: 308 GTFILASSWVAARSSCHQLEQLDAMLDKELALE 406
           G+FILASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 68  GSFILASSYLQAKASCDQVQALDSVLEKELMLE 100



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 715 KLPIQFDLDELAGAFLANNQKGRMNCVVERR 807
           K+P++ DL +LA A L NN+K RMNCVVER+
Sbjct: 169 KMPLELDLSDLAAAILRNNKKSRMNCVVERK 199


>AE014296-972|AAN12101.1|  625|Drosophila melanogaster CG10596-PC,
           isoform C protein.
          Length = 625

 Score = 71.3 bits (167), Expect = 2e-12
 Identities = 34/60 (56%), Positives = 50/60 (83%)
 Frame = +2

Query: 227 AYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWVAARSSCHQLEQLDAMLDKELALE 406
           AY+ R + SV+IAKI A T++ S+FILG+FILASS++ A++SC Q++ LD++L+KEL LE
Sbjct: 50  AYK-RQANSVKIAKITAFTIIVSAFILGSFILASSYLQAKASCDQVQALDSVLEKELMLE 108



 Score = 47.6 bits (108), Expect = 2e-05
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = +1

Query: 715 KLPIQFDLDELAGAFLANNQKGRMNCVVERR 807
           K+P++ DL +LA A L NN+K RMNCVVER+
Sbjct: 177 KMPLELDLSDLAAAILRNNKKSRMNCVVERK 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,766,677
Number of Sequences: 53049
Number of extensions: 809294
Number of successful extensions: 2541
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2535
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)