Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_F02
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   7.4  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 171 FHYDFEI*MTRTTEKAANCNLTEKTIXIY 85
           FH++  +   R  E AA+ +LTE+ + ++
Sbjct: 23  FHFNKYLCRPRRIEIAASLDLTERQVKVW 51


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 311 IFFNASFFIMKLEPMKILDEI 249
           +FF+  +F  KLE M+ + E+
Sbjct: 15  LFFSQMYFTKKLEQMRQVHEV 35


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 171 FHYDFEI*MTRTTEKAANCNLTEKTIXIY 85
           FH    +   R  + A N NLTE+ I I+
Sbjct: 104 FHRSKYLCRPRRIQMAQNLNLTERQIKIW 132


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 171 FHYDFEI*MTRTTEKAANCNLTEKTIXIY 85
           FH    +   R  + A N NLTE+ I I+
Sbjct: 124 FHRSKYLCRPRRIQMAQNLNLTERQIKIW 152


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 171 FHYDFEI*MTRTTEKAANCNLTEKTIXIY 85
           FH++  +   R  E AA+ +LTE+ + ++
Sbjct: 154 FHFNKYLCRPRRIEIAASLDLTERQVKVW 182


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 555 YYWINCICYSFS 590
           YYW+N  C + S
Sbjct: 55  YYWLNVCCLNLS 66


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 488 LCFLQSF*MRS*ILWGRLPVFYVLLDQLYLLFILRNQKKLKT 613
           LCFL    +   IL   L  FY ++ Q++  F L     L+T
Sbjct: 277 LCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLET 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,680
Number of Sequences: 336
Number of extensions: 3644
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)