Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_F02
(888 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1398 - 29867458-29867582,29868460-29868577,29868665-298687... 137 1e-32
05_04_0402 - 20991628-20991755,20992461-20992578,20992670-209927... 137 1e-32
01_06_1567 + 38293612-38293795,38294467-38294523,38294609-382946... 137 1e-32
05_04_0366 - 20663243-20663388,20663467-20663572,20664275-206643... 134 9e-32
01_06_1512 + 37881055-37881229,37881388-37881444,37881537-378816... 128 6e-30
05_06_0058 + 25258532-25258685,25258767-25258823,25258923-252590... 122 5e-28
04_03_0632 + 18200844-18200970,18201134-18201190,18201370-182014... 119 4e-27
11_01_0607 - 4837257-4837447,4837526-4837631,4837913-4838005,483... 97 1e-20
09_04_0353 + 16915618-16916934 33 0.40
04_04_0278 - 24106072-24106254,24106854-24106898,24106985-241070... 30 2.1
11_08_0037 + 27859867-27860382,27860471-27861440,27861647-278619... 29 3.7
>06_03_1398 -
29867458-29867582,29868460-29868577,29868665-29868757,
29868980-29869117,29869193-29869320,29869417-29869577,
29869683-29869773,29869858-29869914,29870654-29870777
Length = 344
Score = 137 bits (332), Expect = 1e-32
Identities = 65/189 (34%), Positives = 103/189 (54%)
Frame = +1
Query: 322 GNVRAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXX 501
G VRA GG+ YL + +WW G++TM +GE VTPLG
Sbjct: 37 GGVRAGGGGYTYLLEPLWWAGMMTMLLGEIANFVAYTFAPAVLVTPLGALSIIVSSFLAH 96
Query: 502 KFLNEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLLM 681
L E+L +G + C CI+GS++ VIH+P+ + E+ N+ + F++Y L++
Sbjct: 97 FVLKERLEKLGVLGCVSCIVGSVIVVIHAPQEHMPNSVEEIWNLAIQPGFLTYAVATLVV 156
Query: 682 CFIIKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFWL 861
+ + F P++G TNI +YL +C ++GSLTVV KA+ + IK G+N + + WL
Sbjct: 157 VAALVLFFEPRYGQTNIMIYLGICSSMGSLTVVSIKAIGVAIK-LTLDGMNQVAYPHTWL 215
Query: 862 LIVSAIICI 888
++ AIIC+
Sbjct: 216 FVIIAIICV 224
>05_04_0402 -
20991628-20991755,20992461-20992578,20992670-20992762,
20992841-20992978,20993070-20993197,20993270-20993430,
20993548-20993638,20993731-20993787,20993986-20994139
Length = 355
Score = 137 bits (332), Expect = 1e-32
Identities = 68/186 (36%), Positives = 99/186 (53%)
Frame = +1
Query: 331 RAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXXKFL 510
RA GG+ YL + +WW+G+ITM IGE VTPLG L
Sbjct: 50 RAGVGGYGYLLEPLWWVGMITMLIGEIANFVAYMFAPAVLVTPLGALSIIVSAVLAHFIL 109
Query: 511 NEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLLMCFI 690
NEKL MG + C LCI+GS V ++H+P+ E + ++ ++ + F+ Y+A L++ I
Sbjct: 110 NEKLQRMGVLGCVLCIVGSTVIILHAPEEETPSSVEQIWHLATQPAFLCYVAFALVVSLI 169
Query: 691 IKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFWLLIV 870
+ P++G TNI +Y+ +C IGSLTV+ KAV + IK G+N F WL
Sbjct: 170 LMAHCAPRYGQTNIAVYIGICSVIGSLTVMSIKAVGIAIK-LTIEGINQAGYFQTWLFAT 228
Query: 871 SAIICI 888
+ ICI
Sbjct: 229 VSAICI 234
>01_06_1567 +
38293612-38293795,38294467-38294523,38294609-38294699,
38294799-38294959,38295045-38295172,38295291-38295428,
38295717-38295809,38298219-38298324,38298393-38298517
Length = 360
Score = 137 bits (332), Expect = 1e-32
Identities = 65/190 (34%), Positives = 103/190 (54%)
Frame = +1
Query: 319 SGNVRAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXX 498
+ VRA GG++YL + +WW G+ITM +GE VTPLG
Sbjct: 56 ASGVRAGVGGYSYLYEPLWWAGMITMIVGEVANFAAYAFAPAILVTPLGALSIIISAVLA 115
Query: 499 XKFLNEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLL 678
L EKL+ G + C LC++GS V+H+P+ EI + +EV + E F+ Y TVL
Sbjct: 116 DIMLKEKLHIFGILGCVLCVVGSTTIVLHAPQEREIDSVAEVWALATEPAFLFYAVTVLA 175
Query: 679 MCFIIKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFW 858
F++ F+P++G T+I +Y+ +C +GSL+V+ KA+ + +K SG+N L+ W
Sbjct: 176 ATFVLIFRFIPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALK-LTFSGMNQLIYPQTW 234
Query: 859 LLIVSAIICI 888
+ + + CI
Sbjct: 235 MFTIVVVACI 244
>05_04_0366 -
20663243-20663388,20663467-20663572,20664275-20664367,
20664520-20664657,20664759-20664886,20664996-20665156,
20665277-20665367,20665460-20665516,20666288-20666444
Length = 358
Score = 134 bits (324), Expect = 9e-32
Identities = 64/190 (33%), Positives = 103/190 (54%)
Frame = +1
Query: 319 SGNVRAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXX 498
+ VRA GG++YL + +WW G+ M +GE VTPLG
Sbjct: 47 ASGVRAGVGGYSYLLEPLWWAGMTAMIVGEIANFAAYAFAPAILVTPLGALSIIISAVLA 106
Query: 499 XKFLNEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLL 678
L EKL+ G + C LC++GS V+H+P +I++ +EV ++ E F+ Y A VL
Sbjct: 107 HIILREKLHIFGILGCILCVVGSTSIVLHAPPERQIESVAEVWDLATEPAFLLYAAIVLA 166
Query: 679 MCFIIKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFW 858
F++ FVP++G T+I +Y+ +C +GSL+V+ KA+ + +K SG+N LV W
Sbjct: 167 AAFVLIFHFVPQYGQTHIMVYIGVCSLVGSLSVMSVKALGIALK-LTFSGMNQLVYPQMW 225
Query: 859 LLIVSAIICI 888
+ ++ + CI
Sbjct: 226 VFLLFVVACI 235
>01_06_1512 +
37881055-37881229,37881388-37881444,37881537-37881627,
37881759-37881919,37882002-37882129,37882215-37882352,
37882665-37882757,37882858-37882975,37883064-37883194
Length = 363
Score = 128 bits (309), Expect = 6e-30
Identities = 63/186 (33%), Positives = 95/186 (51%)
Frame = +1
Query: 331 RAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXXKFL 510
RA GG+ YL + +WW+G++TM +GE VTPLG L
Sbjct: 57 RAGVGGYGYLLEPLWWVGMVTMLVGEIANFIAYMFAPAVLVTPLGALSIIVSAVLAHFTL 116
Query: 511 NEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLLMCFI 690
NEKL +G + C LCI+GS V ++H+P+ + E+ ++ + F+ Y + +
Sbjct: 117 NEKLQRVGVLGCVLCIVGSTVIILHAPQERTPSSVDEIWHLAIQPDFLCYATAAVAVSLF 176
Query: 691 IKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFWLLIV 870
+ I P++G NI +Y+ +C IGSLTV+ KAV + IK G+N F WL V
Sbjct: 177 LMIYCAPRYGQMNIMVYVGICSVIGSLTVMSIKAVGIAIK-LTIEGINQAGYFQTWLFAV 235
Query: 871 SAIICI 888
+I CI
Sbjct: 236 ISITCI 241
>05_06_0058 +
25258532-25258685,25258767-25258823,25258923-25259013,
25259074-25259282,25259421-25259548,25259651-25259788,
25261017-25261083,25261232-25261353
Length = 321
Score = 122 bits (293), Expect = 5e-28
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 16/206 (7%)
Frame = +1
Query: 319 SGNVRAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXX 498
+ +RA GG++YL + +WW+G+ITM +GE VTPLG
Sbjct: 46 ASGIRAGVGGYSYLLEPLWWVGMITMIVGEVANFVAYAFAPAVLVTPLGALSIIVSVILR 105
Query: 499 XK----------------FLNEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVN 630
LNE+L+ +G + C +CI GS+V VIH+P+ +EI + E+ N
Sbjct: 106 VVCVFGGVFAFSAVLAHFILNERLHALGVLGCVMCIAGSVVIVIHAPQEQEITSVREIWN 165
Query: 631 MLCEFLFISYMATVLLMCFIIKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIK 810
M + F+ Y+A+V+++ F++ F P +G +N+ +Y +C +GSL+V+ KA+ +K
Sbjct: 166 MAIQPAFLLYVASVIVVVFVLVFHFSPLYGQSNVLIYTAICSLMGSLSVMSVKALGTSLK 225
Query: 811 EFVTSGVNNLVNFYFWLLIVSAIICI 888
G N LV W ++ C+
Sbjct: 226 -LTFEGTNQLVYPETWFFVLIVATCV 250
>04_03_0632 +
18200844-18200970,18201134-18201190,18201370-18201460,
18201545-18201705,18202176-18202303,18202386-18202523,
18202966-18203058,18203546-18203704
Length = 317
Score = 119 bits (286), Expect = 4e-27
Identities = 58/186 (31%), Positives = 97/186 (52%)
Frame = +1
Query: 328 VRAAAGGFAYLKQWMWWLGLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXXKF 507
VRA +GG++YL + +WW+G+ M +GE VTPLG
Sbjct: 40 VRAGSGGYSYLYEPLWWIGMTAMILGEVANFAAYAFAPAILVTPLGALSIIFSAVLAHFI 99
Query: 508 LNEKLNFMGKIACFLCIIGSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLLMCF 687
L E+L+ G + C LC++GS+ V+H+PK ++I + +E+ ++ + FI Y +++
Sbjct: 100 LKERLHMFGIVGCILCVVGSVGIVLHAPKEKKIDSVNEIWHLATQPGFIVYSCMAVVVAL 159
Query: 688 IIKIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFWLLI 867
I+ V + + Y+ +C +GSLTV+ KAVA+ +K +GVN + W I
Sbjct: 160 ILIFWVVHRTEQRKMLAYIAICSLMGSLTVISVKAVAIALK-LSFNGVNQFIYVPTWFFI 218
Query: 868 VSAIIC 885
V +IC
Sbjct: 219 VVVVIC 224
>11_01_0607 -
4837257-4837447,4837526-4837631,4837913-4838005,
4838405-4838542,4838651-4838778,4838889-4839049,
4839145-4839235,4841437-4841602
Length = 357
Score = 97.5 bits (232), Expect = 1e-20
Identities = 53/169 (31%), Positives = 81/169 (47%)
Frame = +1
Query: 382 GLITMSIGEXXXXXXXXXXXXXXVTPLGXXXXXXXXXXXXKFLNEKLNFMGKIACFLCII 561
G+ + +GE VTPLG L EKL+ G + C LC++
Sbjct: 52 GVRAVIVGEIANFAAYAFAPAILVTPLGALSIIISAALAHAILQEKLHTFGILGCVLCVV 111
Query: 562 GSIVFVIHSPKSEEIKNFSEVVNMLCEFLFISYMATVLLMCFIIKIVFVPKFGNTNITLY 741
GSI V+H+P+ I + EV ++ E F+ Y A V+ ++ VP+ G TNI +Y
Sbjct: 112 GSITIVLHAPQERNIDSVREVWDLATEPGFLCYAAIVVAAALVLIYFVVPQHGQTNIMVY 171
Query: 742 LLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNFYFWLLIVSAIICI 888
+ +C +GSLTV+ KA+ + +K SGVN L W + C+
Sbjct: 172 IGVCSLLGSLTVMSVKALGIALK-LTFSGVNQLFYPQTWAFALIVATCV 219
>09_04_0353 + 16915618-16916934
Length = 438
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 365 CFKYAKPPAAALTFPEAIIFFNASFFIMKLEPMKILD 255
CFK+ PP +T PE ++ F+ + + LE ++D
Sbjct: 354 CFKWPPPPRRMVTLPEMVLHFDGADMELPLENYMVMD 390
>04_04_0278 -
24106072-24106254,24106854-24106898,24106985-24107068,
24107191-24107389,24108281-24108432
Length = 220
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 534 EDCLFSMYYWINCICYSFSEIRRN*KLFGSCEY 632
+DC+ W NC ++ SEIR N L G C Y
Sbjct: 98 DDCVVKDMDWKNCAHHACSEIRAN-HLSGDCHY 129
>11_08_0037 +
27859867-27860382,27860471-27861440,27861647-27861991,
27862074-27862693
Length = 816
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 694 KIVFVPKFGNTNITLYLLLCXAIGSLTVVFCKAVALGIKEFVTSGVNNLVNF 849
K VFVP + +++ L +C A G + V G+ + V++ V+F
Sbjct: 757 KSVFVPAWSTVSVSFELNVCKAFGIVEKTAYTVVPSGVSTILVENVDSSVSF 808
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,379,502
Number of Sequences: 37544
Number of extensions: 293338
Number of successful extensions: 624
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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