Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E23
         (901 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    26   0.46 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   4.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.7  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   7.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   7.5  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 538 IHVFFFLIPFSFHRRLRTTLVSIYLCLRIVVLSLST 431
           I   F L+P   H RL   +  +YL    VVLSL +
Sbjct: 13  ISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 128 VSIYLAQDVHSHQRFRRPEDKAGGSRRQARRDR 226
           +S ++ ++ H  +   R   ++GG RRQ R  R
Sbjct: 563 LSNHMVKNSHYKEHIMRSITESGGRRRQTREKR 595


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +1

Query: 136 LSCPRCPFTSK 168
           L+CP+CPF ++
Sbjct: 231 LTCPKCPFITE 241


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 591 FKFITDVKNIFSSFIKNVYMFFFF 520
           F+F+  V NIF +F+  ++    F
Sbjct: 66  FRFVYAVYNIFGAFVMGLFCILKF 89


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 625 CKKYWSCCNQT 657
           C +YW+C N T
Sbjct: 112 CTRYWTCWNGT 122


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +1

Query: 625 CKKYWSCCNQTIQ 663
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +1

Query: 625 CKKYWSCCNQTIQ 663
           C KYW C N   +
Sbjct: 38  CDKYWKCDNNVAE 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,396
Number of Sequences: 336
Number of extensions: 3202
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)