Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E22
(883 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 100 2e-21
SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10) 65 6e-11
SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) 61 1e-09
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 42 5e-04
SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_48419| Best HMM Match : SH2 (HMM E-Value=4.6e-13) 34 0.13
SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22) 34 0.18
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 34 0.18
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30) 33 0.23
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 31 1.2
SB_9628| Best HMM Match : SOCS_box (HMM E-Value=6.3e-11) 31 1.2
SB_6631| Best HMM Match : SOCS_box (HMM E-Value=1.5e-10) 30 2.2
SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16) 29 3.8
SB_23313| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 100 bits (239), Expect = 2e-21
Identities = 61/149 (40%), Positives = 79/149 (53%), Gaps = 12/149 (8%)
Frame = +3
Query: 111 NHGWYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHANGFF 290
N GWYWG ++S EAE+ L Q D FLVRDS + H+L VSFR G T H RL++ G F
Sbjct: 342 NCGWYWGPMSSKEAEKELYNQPDGCFLVRDSENDYHLLSVSFRSKGATCHTRLIYNKGKF 401
Query: 291 SL--DNETFVPAYRLSEH----------CSAVNVKTNLFEMPVKLARPLNRFAKLDSLQK 434
S D AY L H C++ N PV+L P++RF + LQ
Sbjct: 402 SFFQDEMGKDSAYELIMHAMEASQDGILCNSRGHNRNTICYPVRLQVPISRFNTVPPLQF 461
Query: 435 ICRFVIRQTGSSNTWAKLPLPPNLISYIS 521
+CRFVIRQ + +LPLP +I +S
Sbjct: 462 LCRFVIRQNIRCDQLDQLPLPKQIIRNLS 490
>SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10)
Length = 265
Score = 65.3 bits (152), Expect = 6e-11
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +3
Query: 117 GWYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHANGFFSL 296
GW+WG + +AE++LAG+ D FLVRDS +S +L VS R T+H R+++ NG F L
Sbjct: 170 GWFWGAMRYEDAEQVLAGRPDGSFLVRDSTNSFDLLVVSVRSQSTTIHVRVMYTNGCFHL 229
Query: 297 DN 302
+
Sbjct: 230 SH 231
>SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11)
Length = 421
Score = 61.3 bits (142), Expect = 1e-09
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Frame = +3
Query: 111 NHGWYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL---LHAN 281
N WYWG I EAE +L G D FL+RDS +++ VSFR RT HAR+ H
Sbjct: 255 NCPWYWGKINRFEAERVLDGLPDGTFLLRDSAQYQYLFSVSFRRYFRTYHARIEQWKHRY 314
Query: 282 GFFSLDNETFV--PAYRLSEHCSAVNVKTNLFEMPVKLARPLNRFAKLDSLQKICRFVIR 455
F + +F + L +H S + ++ P+ L L R L LQ +CR I
Sbjct: 315 SFDKPSDYSFCSKTLHELLQHYS--QAEQCMYYEPL-LLNALPRKNTL-PLQHLCRATIC 370
Query: 456 QTGSSNTWAKLPLPPNLISYI 518
+ S +LP+P +L +++
Sbjct: 371 KNVSFQDVDELPIPKSLQTFL 391
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 42.3 bits (95), Expect = 5e-04
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHANGFFSLD 299
W+ G I ++EELL + D +FLVR+S + +S C G+ H R++ + ++D
Sbjct: 203 WFHGKIEREKSEELLQPRTDGLFLVRESRNYVGDYTLSVCCNGKVEHYRVIFKDNMLTVD 262
Query: 300 NET-FVPAYRLSEH 338
E F +L EH
Sbjct: 263 EEEYFENLTKLVEH 276
>SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 39.1 bits (87), Expect = 0.005
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 114 HGWYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHA--NGF 287
H WY G I+ + AE LL+ + FLVR+S S L +S R R H R+ + N +
Sbjct: 101 HSWYHGQISRNAAEYLLSSGINGSFLVRESESSPGQLSISLRYDERVYHYRVSTSVDNKY 160
Query: 288 FSLDNETFVPAYRLSEHCS 344
+ + F L H S
Sbjct: 161 YVSSDNRFSTIAELVHHHS 179
>SB_48419| Best HMM Match : SH2 (HMM E-Value=4.6e-13)
Length = 274
Score = 34.3 bits (75), Expect = 0.13
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 111 NHGWYWGGITSSEAEELLAG---QHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL-LHA 278
++ W+ G ++ EA +L++ Q +FL+R S R ++F GR H RL L+
Sbjct: 106 HYPWFHGTLSRIEASQLVSQGSQQWHGIFLIRQSETRRGEYVLTFNYQGRAKHLRLSLNN 165
Query: 279 NGFFSLDNETFVPAYRLSEHCSA 347
G + + F + + EH A
Sbjct: 166 EGQCRVQHLWFPSIFEMLEHFRA 188
>SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22)
Length = 192
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAG-QHDNVFLVR----DSYDSRHILCVSFRCVGRTLHARLLHANG 284
WY +T S AE++L + D FLVR D +SFR + H +L
Sbjct: 2 WYHDNLTRSAAEDMLKRVRKDGAFLVRRRERDDRTGEESYAISFRAEKKIKHCKLRREGR 61
Query: 285 FFSLDNETFVPAYRLSE 335
FS+ F L E
Sbjct: 62 LFSIGTAQFESLVELVE 78
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAG-QHDNVFLVR----DSYDSRHILCVSFRCVGRTLHARLLHANG 284
WY +T S AE++L + D FLVR D +SFR + H +L
Sbjct: 97 WYHDNLTRSAAEDMLKRVRKDGAFLVRRRERDDRTGEESYAISFRAEKKIKHCKLRREGR 156
Query: 285 FFSLDNETFVPAYRLSE 335
FS+ F L E
Sbjct: 157 LFSIGTAQFESLVELVE 173
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 33.5 bits (73), Expect = 0.23
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAG--QHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHAN--GF 287
W++G I EAE+LL FL+RDS ++ + +S R H R+ ++ GF
Sbjct: 136 WFYGPIKRPEAEKLLQSPPNEHGAFLIRDS--NKGLFALSMRDGDMIKHYRIRKSDTGGF 193
Query: 288 FSLDNETFVPAYRLSEH 338
F N F L H
Sbjct: 194 FISHNNVFTSLKDLVAH 210
>SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30)
Length = 94
Score = 33.5 bits (73), Expect = 0.23
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAG--QHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHAN--GF 287
W++G I EAE+LL FL+RDS ++ + +S R H R+ ++ GF
Sbjct: 2 WFYGPIKRPEAEKLLQSPPNEHGAFLIRDS--NKGLFALSMRDGDMIKHYRIRKSDTGGF 59
Query: 288 FSLDNETFVPAYRLSEH 338
F N F L H
Sbjct: 60 FISHNNVFTSLKDLVAH 76
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 111 NHGWYWGGITSSEAEELLAGQ-HDNVFLVRDS 203
N W+WG I+ + E+LL D FLVR+S
Sbjct: 373 NQEWFWGRISRRQGEQLLLNHGTDGDFLVRES 404
>SB_9628| Best HMM Match : SOCS_box (HMM E-Value=6.3e-11)
Length = 148
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 426 LQKICRFVIRQTGSSNTWAKLPLPPNLISYI 518
LQ +CR VI Q +N +LPLP +L +Y+
Sbjct: 97 LQHLCRIVINQLVPANRIHELPLPKSLKAYL 127
>SB_6631| Best HMM Match : SOCS_box (HMM E-Value=1.5e-10)
Length = 330
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 423 SLQKICRFVIRQTGSSNTWAKLPLPPNLISYI 518
+LQ +CR I + + KLP+PP + SY+
Sbjct: 294 NLQDLCRLAINEAVPAKDIHKLPVPPRIKSYL 325
>SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16)
Length = 720
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAG-QHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLL 272
W+ I E E+LL G D FL+RDS + +S G H R+L
Sbjct: 5 WHHKAINRLETEKLLLGCGEDGGFLIRDSESIPNAFVLSILFQGHIHHYRIL 56
>SB_23313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 129 GGITSSEAEELLAGQHDNVFLVRDSYDSRHI 221
G IT S+ L G+ N+F+V SY+++HI
Sbjct: 6 GKITRSKLRWLEKGETLNIFIVLKSYNNKHI 36
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,927,568
Number of Sequences: 59808
Number of extensions: 528963
Number of successful extensions: 1198
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2514529411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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