Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E22
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 52 4e-07
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 52 4e-07
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 37 0.022
AC024796-4|AAK29898.3| 539|Caenorhabditis elegans C-terminal sr... 37 0.022
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 37 0.022
AB096875-1|BAC76831.1| 539|Caenorhabditis elegans CSK-1 protein. 37 0.022
Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr... 36 0.051
M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein ( C.ele... 36 0.051
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 35 0.089
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 35 0.089
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 35 0.089
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 35 0.089
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 34 0.15
U39995-6|AAF99997.1| 452|Caenorhabditis elegans Hypothetical pr... 33 0.36
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 29 3.3
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 29 3.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 29 3.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 29 3.3
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 29 4.4
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z92834-9|CAB07386.2| 192|Caenorhabditis elegans Hypothetical
protein F39B2.5 protein.
Length = 192
Score = 58.0 bits (134), Expect = 8e-09
Identities = 50/164 (30%), Positives = 68/164 (41%), Gaps = 18/164 (10%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHANG----- 284
WYWG + AE LL FL+RDS H+ VS+ R H+RL +
Sbjct: 16 WYWGDLDWKWAERLLLLCPIGYFLIRDSRSETHLFTVSYHFQDRVYHSRLSLEDSRRNLG 75
Query: 285 ----FFSLDNETFVPAYRLSEHCSAVNVKTNLF--------EMPVKLARPLNRFAKLDSL 428
+ S D V S S + L V L RPL + L SL
Sbjct: 76 SRQPYVSRDYWNLVEIIERSLEQSLTGQQEMLHYRRGHEAEAARVNLTRPLTKRELLPSL 135
Query: 429 QKICRFVIRQTGSSNTWAK-LPLPPNLISYISMGSDYIIP*LSR 557
Q +CRF ++ + K PLPP ++ Y+S S +IIP L +
Sbjct: 136 QYLCRFTLKTSQQKPPTPKTAPLPPTILKYLS-DSKWIIPDLKK 178
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHANGFFSLD 299
WY+G I+ AE+LL + FLVRDS + L +S R + R H ++ + +G +
Sbjct: 192 WYFGRISRERAEDLLLHGREGEFLVRDSESNPGDLSISMRGIERNKHFKVQNVDGLLKIG 251
Query: 300 NETFVPAYRLSEH 338
N TFV L H
Sbjct: 252 NRTFVDMNALINH 264
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARLLHANGFFSLD 299
WY+G I+ AE+LL + FLVRDS + L +S R + R H ++ + +G +
Sbjct: 301 WYFGRISRERAEDLLLHGREGEFLVRDSESNPGDLSISMRGIERNKHFKVQNVDGLLKIG 360
Query: 300 NETFVPAYRLSEH 338
N TFV L H
Sbjct: 361 NRTFVDMNALINH 373
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 117 GWYWGGITSSEAEELLAGQHDNVFLVRD-SYDSRHILCVSFRCVGRTLHARLLHANGFFS 293
GWYW S + L+ Q D F+VR+ S + L V F + L + F+
Sbjct: 19 GWYWADADRSAVSKALSDQPDGSFIVRNASTPGDYTLSVKFAAQVKLLRIVVKDGKCGFN 78
Query: 294 LDNETFVPAYRLSEHCSAVNVKTNLFE--MPVKLARPLN 404
D+ T RL E N+ N+F + V+L P++
Sbjct: 79 TDSLTHDSVVRLIEFHR--NISLNIFNDALDVRLLYPVS 115
>AC024796-4|AAK29898.3| 539|Caenorhabditis elegans C-terminal src
kinase protein 1 protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 111 NHG-WYWGGITSSEAEELLAGQHDNVFLVRDS--YDSRHILCVSFRCVGRTLHARLLHAN 281
NH W+ I+ E+LL G+ D FLVR+S + LC+SF G+ H R+ +
Sbjct: 147 NHQPWFHSMISRENTEKLLRGKPDGTFLVRESTNFPGDFTLCMSFH--GKVEHYRIEQTS 204
Query: 282 G 284
G
Sbjct: 205 G 205
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 36.7 bits (81), Expect = 0.022
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Frame = +3
Query: 117 GWYWGGITSSEAEELLAGQHDNVFLVRD-SYDSRHILCVSFRCVGRTLHARLLHANGFFS 293
GWYW S + L+ Q D F+VR+ S + L V F + L + F+
Sbjct: 19 GWYWADADRSAVSKALSDQPDGSFIVRNASTPGDYTLSVKFAAQVKLLRIVVKDGKCGFN 78
Query: 294 LDNETFVPAYRLSEHCSAVNVKTNLFE--MPVKLARPLN 404
D+ T RL E N+ N+F + V+L P++
Sbjct: 79 TDSLTHDSVVRLIEFHR--NISLNIFNDALDVRLLYPVS 115
>AB096875-1|BAC76831.1| 539|Caenorhabditis elegans CSK-1 protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.022
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +3
Query: 111 NHG-WYWGGITSSEAEELLAGQHDNVFLVRDS--YDSRHILCVSFRCVGRTLHARLLHAN 281
NH W+ I+ E+LL G+ D FLVR+S + LC+SF G+ H R+ +
Sbjct: 147 NHQPWFHSMISRENTEKLLRGKPDGTFLVRESTNFPGDFTLCMSFH--GKVEHYRIEQTS 204
Query: 282 G 284
G
Sbjct: 205 G 205
>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
protein M79.1c protein.
Length = 1209
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL 269
WY G I+ S++E +L FLVR+S S +S R GR H R+
Sbjct: 179 WYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRI 228
>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
protein M79.1b protein.
Length = 1214
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL 269
WY G I+ S++E +L FLVR+S S +S R GR H R+
Sbjct: 184 WYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRI 233
>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
protein M79.1a protein.
Length = 1224
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL 269
WY G I+ S++E +L FLVR+S S +S R GR H R+
Sbjct: 194 WYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRI 243
>M13235-1|AAA28129.1| 552|Caenorhabditis elegans protein (
C.elegans DNA homologousto the v-abl oncogene. ).
Length = 552
Score = 35.5 bits (78), Expect = 0.051
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL 269
WY G I+ S++E +L FLVR+S S +S R GR H R+
Sbjct: 45 WYHGKISRSDSEAILGSGITGSFLVRESETSIGQYTISVRHDGRVFHYRI 94
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -2
Query: 342 NNVQIIYMLAQMFHYLEKKSH-LHVKDVHAVYGQHNEKKRRECVWSHTSLGLKKRCHVGQ 166
N +Q++ + H +EK H LH++ V + + + R + S + KKR H+
Sbjct: 2218 NTLQVLPDAPRAIHLIEKTDHSLHIRWVPPIDPKGYVTQYRVSIVSLDDVNDKKRTHIVN 2277
Query: 165 QATLLLHWT*FHPNTSHDFSLPLET 91
TL + +P TS++ S+ T
Sbjct: 2278 HPTLTYLFEELNPETSYNISISAGT 2302
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -2
Query: 342 NNVQIIYMLAQMFHYLEKKSH-LHVKDVHAVYGQHNEKKRRECVWSHTSLGLKKRCHVGQ 166
N +Q++ + H +EK H LH++ V + + + R + S + KKR H+
Sbjct: 2218 NTLQVLPDAPRAIHLIEKTDHSLHIRWVPPIDPKGYVTQYRVSIVSLDDVNDKKRTHIVN 2277
Query: 165 QATLLLHWT*FHPNTSHDFSLPLET 91
TL + +P TS++ S+ T
Sbjct: 2278 HPTLTYLFEELNPETSYNISISAGT 2302
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -2
Query: 342 NNVQIIYMLAQMFHYLEKKSH-LHVKDVHAVYGQHNEKKRRECVWSHTSLGLKKRCHVGQ 166
N +Q++ + H +EK H LH++ V + + + R + S + KKR H+
Sbjct: 2218 NTLQVLPDAPRAIHLIEKTDHSLHIRWVPPIDPKGYVTQYRVSIVSLDDVNDKKRTHIVN 2277
Query: 165 QATLLLHWT*FHPNTSHDFSLPLET 91
TL + +P TS++ S+ T
Sbjct: 2278 HPTLTYLFEELNPETSYNISISAGT 2302
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 34.7 bits (76), Expect = 0.089
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -2
Query: 342 NNVQIIYMLAQMFHYLEKKSH-LHVKDVHAVYGQHNEKKRRECVWSHTSLGLKKRCHVGQ 166
N +Q++ + H +EK H LH++ V + + + R + S + KKR H+
Sbjct: 2218 NTLQVLPDAPRAIHLIEKTDHSLHIRWVPPIDPKGYVTQYRVSIVSLDDVNDKKRTHIVN 2277
Query: 165 QATLLLHWT*FHPNTSHDFSLPLET 91
TL + +P TS++ S+ T
Sbjct: 2278 HPTLTYLFEELNPETSYNISISAGT 2302
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAG--QHDNVFLVRDSYDSRHILCVSFRCVGRTLHARL--LHANGF 287
WY+G + +AE+ L FLVRDS +H L +S R H R+ L G+
Sbjct: 124 WYFGKMRRIDAEKCLLHTLNEHGAFLVRDSESRQHDLSLSVRENDSVKHYRIRQLDHGGY 183
Query: 288 FSLDNETFVPAYRLSEH 338
F F + L H
Sbjct: 184 FIARRRPFATLHDLIAH 200
>U39995-6|AAF99997.1| 452|Caenorhabditis elegans Hypothetical
protein M60.7 protein.
Length = 452
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 375 MPVKLARPLNRFAKLD-SLQKICRFVIRQTGSSNTWAKLPLPPNLISYI 518
+P +L ++ AK SLQ +CR IR T ++ + LP+P L +Y+
Sbjct: 399 LPTQLKTDISERAKNPHSLQHLCRIQIRDTVQTSEYKTLPIPEYLKAYL 447
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -1
Query: 460 VCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNLYAGTNVSLS 296
+ L+ +L F S + R +S F L+ ++C+DN Y N SLS
Sbjct: 4 ILLLIHLPSFSTFESSFKMIRVFGRPVELSGTVEFNLSIDECTDNCYDDDNCSLS 58
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 502 FGGKGNLAQVFDDPVCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNL 323
+GG G FD ++ + +L RG + +SN++ F A QC
Sbjct: 1367 YGGCGGNPNRFDTFEICQKACEVTGTDPCMESLDRG-SWCEAMSNRYYFNKRARQCKGFH 1425
Query: 322 YAGTNVS----LSREKKPFACKRRACSVRPTQRK 233
Y G S L++E+ C++R P+++K
Sbjct: 1426 YTGCGKSGNNFLTKEECQTKCEKRFPRAAPSKKK 1459
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 502 FGGKGNLAQVFDDPVCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNL 323
+GG G FD ++ + +L RG + +SN++ F A QC
Sbjct: 1581 YGGCGGNPNRFDTFEICQKACEVTGTDPCMESLDRG-SWCEAMSNRYYFNKRARQCKGFH 1639
Query: 322 YAGTNVS----LSREKKPFACKRRACSVRPTQRK 233
Y G S L++E+ C++R P+++K
Sbjct: 1640 YTGCGKSGNNFLTKEECQTKCEKRFPRAAPSKKK 1673
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 502 FGGKGNLAQVFDDPVCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNL 323
+GG G FD ++ + +L RG + +SN++ F A QC
Sbjct: 1717 YGGCGGNPNRFDTFEICQKACEVTGTDPCMESLDRG-SWCEAMSNRYYFNKRARQCKGFH 1775
Query: 322 YAGTNVS----LSREKKPFACKRRACSVRPTQRK 233
Y G S L++E+ C++R P+++K
Sbjct: 1776 YTGCGKSGNNFLTKEECQTKCEKRFPRAAPSKKK 1809
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 502 FGGKGNLAQVFDDPVCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNL 323
+GG G FD ++ + +L RG + +SN++ F A QC
Sbjct: 1758 YGGCGGNPNRFDTFEICQKACEVTGTDPCMESLDRG-SWCEAMSNRYYFNKRARQCKGFH 1816
Query: 322 YAGTNVS----LSREKKPFACKRRACSVRPTQRK 233
Y G S L++E+ C++R P+++K
Sbjct: 1817 YTGCGKSGNNFLTKEECQTKCEKRFPRAAPSKKK 1850
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 502 FGGKGNLAQVFDDPVCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNL 323
+GG G FD ++ + +L RG + +SN++ F A QC
Sbjct: 1769 YGGCGGNPNRFDTFEICQKACEVTGTDPCMESLDRG-SWCEAMSNRYYFNKRARQCKGFH 1827
Query: 322 YAGTNVS----LSREKKPFACKRRACSVRPTQRK 233
Y G S L++E+ C++R P+++K
Sbjct: 1828 YTGCGKSGNNFLTKEECQTKCEKRFPRAAPSKKK 1861
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Frame = -1
Query: 502 FGGKGNLAQVFDDPVCLMTNLQIFCRESSFANLFRGLASFTGISNKFVFTLTAEQCSDNL 323
+GG G FD ++ + +L RG + +SN++ F A QC
Sbjct: 1770 YGGCGGNPNRFDTFEICQKACEVTGTDPCMESLDRG-SWCEAMSNRYYFNKRARQCKGFH 1828
Query: 322 YAGTNVS----LSREKKPFACKRRACSVRPTQRK 233
Y G S L++E+ C++R P+++K
Sbjct: 1829 YTGCGKSGNNFLTKEECQTKCEKRFPRAAPSKKK 1862
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 120 WYWGGITSSEAEELLAGQHDNVFLVR 197
W+WG IT +EAE L FLVR
Sbjct: 84 WFWGMITQTEAEGHLKDCRHGEFLVR 109
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 117 GWYWGGITSSEAEELLAGQHDNVFLVRDSYDSRHI 221
GW W I SSE + G +DN + D +++ +
Sbjct: 326 GWNWDAIFSSEGRYIFTGGNDNQVKIWDVENNKKV 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,162,254
Number of Sequences: 27780
Number of extensions: 422541
Number of successful extensions: 941
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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