Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E21
(877 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyce... 142 4e-35
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 56 9e-09
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 45 1e-05
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 41 2e-04
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 39 0.001
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 29 0.66
SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltra... 28 1.5
SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|c... 27 2.7
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.5
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 3.5
SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit Cdc22|... 27 3.5
SPCC70.03c |||proline dehydrogenase|Schizosaccharomyces pombe|ch... 27 4.6
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 26 6.1
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 6.1
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 26 6.1
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 8.1
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 26 8.1
SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1 |... 26 8.1
>SPBC25D12.03c |mcm7||MCM complex subunit Mcm7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 760
Score = 142 bits (345), Expect = 4e-35
Identities = 76/229 (33%), Positives = 127/229 (55%), Gaps = 5/229 (2%)
Frame = +2
Query: 176 KNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEA---VKQNT 346
+N + DE KY + L K+++RE VDL+DL+E + T+ ++ N
Sbjct: 37 QNQDISMSDAGDEPFLKSKYMDILQKISNRESNVINVDLNDLYEFDPSDTQLLHNIESNA 96
Query: 347 RRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRIPGEMRDPRNR-YPP 523
+R+ + S ++P + + LDV ++ R+ RN I DP ++ +PP
Sbjct: 97 KRFVELFSQCADALMPPPTVEINYRNEVLDVIMQQRVQ---RNENI-----DPEHKGFPP 148
Query: 524 ELIRRFEVYFKDLSTSKS-VPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSAC 700
EL R +++YF+ ++ +K +R+++ E++G L+TVRGIVTR +DVKP L V Y+C C
Sbjct: 149 ELTRGYDLYFRPVTRNKKPFSVRDLRGENLGSLLTVRGIVTRTSDVKPSLTVNAYTCDRC 208
Query: 701 GAETYQPVRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFRSLR 847
G E +Q +R F P C +D+C+ N GQL + TR S+F F+ ++
Sbjct: 209 GYEVFQEIRQKTFLPMSECPSDECKKNDAKGQLFMSTRASKFLPFQEVK 257
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 55.6 bits (128), Expect = 9e-09
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +2
Query: 584 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPACTA 763
IR+++ + IG+L T+ G VTR ++V+P L T+ C C +A ++T P C
Sbjct: 198 IRDLRTDRIGRLTTITGTVTRTSEVRPELAQGTFICEECHTVVSNVEQAFRYTEPTQCPN 257
Query: 764 DDCRLNKTAGQLHLQTRGSRFQKFRSLR 847
+ C NK + +L++ S FQ ++ +R
Sbjct: 258 ELC-ANKRSWRLNISQ--SSFQDWQKVR 282
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 45.2 bits (102), Expect = 1e-05
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Frame = +2
Query: 494 MRDPRNRYPPELIRR---FEVY-FKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVK 661
M D PPE + ++Y + + K + +R++ I KL++++G+V RCT V
Sbjct: 257 MLDLLGTNPPEDVLNDIELKIYKIRPFNLEKCINMRDLNPGDIDKLISIKGLVLRCTPVI 316
Query: 662 PLLVVATYSCSACGAETYQPVRALQFTPPPACTADDCRLNKTAGQLH 802
P + A + CS CG + + P C + C +H
Sbjct: 317 PDMKQAFFRCSVCGHCVTVEIDRGRIAEPIKCPREVCGATNAMQLIH 363
>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 879
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 539 FEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSA 697
F V F+ V R ++A H+ K++++ GIVTRC+ V+P ++ + + C A
Sbjct: 102 FYVGFRGSFGDHHVNPRTLRAMHLNKMISLEGIVTRCSFVRPKVIKSVHYCEA 154
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 584 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGA 706
+R+++ H+ LV V G+VTR T + P L ++C+ CGA
Sbjct: 299 LRDLRQSHLNCLVRVSGVVTRRTGLFPQLKYIRFTCTKCGA 339
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 29.5 bits (63), Expect = 0.66
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 578 VPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGA 706
+PIR + A HI KLV V GI+ + + C C A
Sbjct: 130 LPIRNLTASHISKLVRVPGIIIGASTLSCRATALHLVCRNCRA 172
>SPBC342.06c |rtt109|kat11|RTT109 family histone lysine
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 369
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -2
Query: 249 VSCSAYLKYFFPSSSV*QKSTKKFLKDSLSAV 154
V+ LK+ F S S Q ST+KFL ++LSAV
Sbjct: 291 VTYDTLLKHPFGSLSDAQSSTEKFLSNTLSAV 322
>SPBC119.14 |rti1||Rad22 homolog Rti1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 371
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/80 (17%), Positives = 34/80 (42%)
Frame = +2
Query: 305 EMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRI 484
E + + + + ++++ + ++E LP + + + D+Y + + +H
Sbjct: 203 EHKNSIEKKISNVDKPISDLIENDIHESLPALQNPPIQSHSETDLYADEELDSILMHHER 262
Query: 485 PGEMRDPRNRYPPELIRRFE 544
P PR EL+ +FE
Sbjct: 263 PPIPESPRVEEFEELLNQFE 282
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = +2
Query: 329 AVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRIPGEMRDPR 508
A+ +++R Y VS + LP + + +++ + HR+ E+ ++R GE
Sbjct: 88 AMSRSSRYY---VSSELKATLPSLDGRRLSKRNAANHASHHRMPDESASYRTRGEYESSS 144
Query: 509 NRYPPELIRRF 541
R P + +RR+
Sbjct: 145 PRVPQKSLRRY 155
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 3.5
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 188 VDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMV 367
+ TD++ + E+ ++ RE+ +D+L + E LT+A + RR ++
Sbjct: 280 IPVASTDEQLFNAHQLLEKKFEILKRERNECNAKIDELQDKLELLTDAYNREKRRARSLE 339
Query: 368 SDVVYEML 391
+ EML
Sbjct: 340 ERMSKEML 347
>SPAC1F7.05 |cdc22||ribonucleoside reductase large subunit
Cdc22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 3.5
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 AEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEV 415
A TK +A + + +LH+ E + V Q Y N +D M+ D K ++
Sbjct: 65 ATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISD-KIYDI 123
Query: 416 VA--KDSLD 436
V KD LD
Sbjct: 124 VMKHKDELD 132
>SPCC70.03c |||proline dehydrogenase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 212 EGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVY 382
E KK+++YA++L + A +QI +D + + +D AV + R N +V+
Sbjct: 242 ELKKFWEYADKLCQFAKEKQIPLFIDAEQTY--FQDCMHAVTVDLMRKYNKEVAIVH 296
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 671 VVATYSCSACGAETYQPVRALQFTPPPACTA 763
++++ CS CG QP+R +F P T+
Sbjct: 436 LLSSQPCSLCGFNRTQPLRQFEFRSRPDSTS 466
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 6.1
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 416 VAKDSLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKD 559
+AK S+ + HR MLE NH E ++ N ELI F V+ +D
Sbjct: 314 IAKGSIGFTMVHRAMLEFINHADSNEAKELLN-LTKELIYEF-VHTRD 359
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 26.2 bits (55), Expect = 6.1
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +2
Query: 44 ILFVMLVVGAGDTFVISI*RQQLFV*HISK---IMAMRDYTADKE--SFKNFFVDFCQTD 208
+LF +LV G G +V++I + K + +T D FK +F +C+
Sbjct: 160 LLFALLVYGTGVIYVLTIALINYLISKSLKNSIFNPLLTWTLDISVVFFKEYFA-YCKFS 218
Query: 209 DEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSD 373
+ +Q T + R + F + + L N D ++K N+ + ++ D
Sbjct: 219 SL-HPGLGFLDQYTGILERWYVLFNITMLRLVSFNMDYYWSLKHNSEKLNTLIFD 272
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 131 KIMAMRDYTADKESFK--NFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLH 304
K++ + T +K + K N ++ D E K +Y E+ TK +++ ++L D
Sbjct: 162 KLLGRGNSTINKSAQKLNNQPIEKSSVDKENAKRKRYVEEGTKQGQKKKPLRVIELSD-E 220
Query: 305 EMNED 319
E NED
Sbjct: 221 ETNED 225
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 167 ESFKNFFVDFCQTDDE 214
+SF NF VD+C+ D+
Sbjct: 53 QSFANFLVDYCKNQDQ 68
>SPBC23E6.08 |sat1||Golgi membrane exchange factor subunit Sat1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 642 VTIPRTVTSFPICSALTSLIGTLFDVDKSLKYT 544
V IP+ +S+ + + L +IG LF V ++ T
Sbjct: 79 VHIPKVSSSYSVINTLNGMIGNLFGVKQASTLT 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,225,891
Number of Sequences: 5004
Number of extensions: 66340
Number of successful extensions: 209
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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