Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E21
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 185 3e-47
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 55 8e-08
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 55 8e-08
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 55 8e-08
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 39 0.005
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 37 0.016
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 33 0.35
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 30 1.9
AF016452-15|AAX88811.1| 349|Caenorhabditis elegans Hypothetical... 30 2.5
AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical... 30 2.5
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81132-14|CAB03432.3| 378|Caenorhabditis elegans Hypothetical p... 29 5.8
U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical pr... 29 5.8
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 29 5.8
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 185 bits (451), Expect = 3e-47
Identities = 92/242 (38%), Positives = 149/242 (61%), Gaps = 9/242 (3%)
Frame = +2
Query: 149 DYTADKESFKNFFVDFCQTDDEGK-KYFKYAEQLTKVAHREQIAFEVDLDDLHEMNE--- 316
D+ A+K ++FF ++ +++G K F Y +Q+ ++A R++ A V++D + E +
Sbjct: 9 DWAAEKTKIRSFFDEYYVDNEDGSGKAFPYRDQVFEIARRDKQAIVVNVDHIKESDIPDA 68
Query: 317 -DLTEAVKQNTRRYTNMVSDVVYEMLPDYKF-KEVVAKDSLDVYIEHRIMLEARNHRIPG 490
+L+EA+ NT+RY + D + +M+ DY K+ D+LD Y+ R+ ++ RN
Sbjct: 69 LELSEAITSNTKRYEVLFKDTISDMIQDYLGDKQAPVIDALDAYMFQRLHMD-RNEGAAN 127
Query: 491 E---MRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVK 661
E ++D R +YPP+L++RFEVYF + +R +KA IG LV+++G+V R T+VK
Sbjct: 128 EEVSLQDKRKKYPPQLLQRFEVYFTTDDAAHETCVRNIKATEIGHLVSMKGVVIRATEVK 187
Query: 662 PLLVVATYSCSACGAETYQPVRALQFTPPPACTADDCRLNKTAGQLHLQTRGSRFQKFRS 841
P + V TY+C C AE YQPV+ +QFTPP C +C K G+LH+Q RGS+F KF+
Sbjct: 188 PCVEVMTYTCDTCAAEVYQPVKGMQFTPPVNCPNKECVEAKANGRLHMQLRGSKFVKFQE 247
Query: 842 LR 847
L+
Sbjct: 248 LK 249
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 54.8 bits (126), Expect = 8e-08
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +2
Query: 398 YKFKEVVAKD-SLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSK 574
YKF +A L Y + M EA H + D R ++ ++ ++Y +
Sbjct: 63 YKFSNNLATTIELQYYRVYPFMCEAL-HLATLDACDESERQ--QMFKK-QLYVSLFNLDA 118
Query: 575 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPA 754
+RE+ A+ +G LV + G + R V P L A + C CG T + ++T P
Sbjct: 119 KTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTK 178
Query: 755 CTADDCRLNKTAGQLHLQTRGSRFQKFRSLRYRSTR 862
C C +N+T + L S F F+ +R + T+
Sbjct: 179 CANPQC-MNRT--RFSLDVNSSTFVDFQKIRIQETQ 211
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 54.8 bits (126), Expect = 8e-08
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +2
Query: 398 YKFKEVVAKD-SLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSK 574
YKF +A L Y + M EA H + D R ++ ++ ++Y +
Sbjct: 63 YKFSNNLATTIELQYYRVYPFMCEAL-HLATLDACDESERQ--QMFKK-QLYVSLFNLDA 118
Query: 575 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPA 754
+RE+ A+ +G LV + G + R V P L A + C CG T + ++T P
Sbjct: 119 KTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTK 178
Query: 755 CTADDCRLNKTAGQLHLQTRGSRFQKFRSLRYRSTR 862
C C +N+T + L S F F+ +R + T+
Sbjct: 179 CANPQC-MNRT--RFSLDVNSSTFVDFQKIRIQETQ 211
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 54.8 bits (126), Expect = 8e-08
Identities = 41/156 (26%), Positives = 68/156 (43%), Gaps = 1/156 (0%)
Frame = +2
Query: 398 YKFKEVVAKD-SLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSK 574
YKF +A L Y + M EA H + D R ++ ++ ++Y +
Sbjct: 63 YKFSNNLATTIELQYYRVYPFMCEAL-HLATLDACDESERQ--QMFKK-QLYVSLFNLDA 118
Query: 575 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQFTPPPA 754
+RE+ A+ +G LV + G + R V P L A + C CG T + ++T P
Sbjct: 119 KTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTK 178
Query: 755 CTADDCRLNKTAGQLHLQTRGSRFQKFRSLRYRSTR 862
C C +N+T + L S F F+ +R + T+
Sbjct: 179 CANPQC-MNRT--RFSLDVNSSTFVDFQKIRIQETQ 211
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 539 FEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSA 697
F V F+ + V R +K+ ++G LV GIVT+C+ V+ L+ + + C A
Sbjct: 103 FHVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYCPA 155
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 584 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACG 703
IR ++ H+ L+ G+VT + + P L V Y C ACG
Sbjct: 270 IRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACG 309
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/72 (20%), Positives = 32/72 (44%)
Frame = +2
Query: 545 VYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPV 724
+ + + K+ +R + + +L+T+ G+VTR + + P + + C+ C V
Sbjct: 221 IELRPFNAQKTRNMRGLNPNDVDQLITISGMVTRTSSLIPEMRSGYFQCAVCAFGIESEV 280
Query: 725 RALQFTPPPACT 760
+ P CT
Sbjct: 281 DKGRIEEPVVCT 292
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 666 SGFTSVHRVTIPRTVTSFPICSALTSLIGTLFDVDKSL-KYTSNLLMSSGGYLFLGSLIS 490
S F SVH +TIPR +C + + + + L + NL SS G L +
Sbjct: 115 SFFVSVHSITIPRIFQKLAVCFGVAMAVLRVIILKYPLNRRGQNLKRSSSGICILLIVCI 174
Query: 489 PGI-LWF 472
P I WF
Sbjct: 175 PHIPFWF 181
>AF016452-15|AAX88811.1| 349|Caenorhabditis elegans Hypothetical
protein T05H4.15c protein.
Length = 349
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 266 EQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKD 427
EQ++F + D L EM++D+++ TRR T DV+ +++ ++ V+ +D
Sbjct: 8 EQLSFGLFGDLLDEMHQDISDQPTLATRRATQKEFDVLCKLIGGFEKWSVLNED 61
>AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical
protein T05H4.15a protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 266 EQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKD 427
EQ++F + D L EM++D+++ TRR T DV+ +++ ++ V+ +D
Sbjct: 8 EQLSFGLFGDLLDEMHQDISDQPTLATRRATQKEFDVLCKLIGGFEKWSVLNED 61
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +2
Query: 314 EDLTEAVKQ-NTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRIPG 490
+DL E VK + + N V + YE LPD + +AK + V E+ I ++ ++
Sbjct: 410 KDLNENVKAFDAEHHENSVLE--YEQLPDVFSEITIAKTPIPVVHENSISGVSKESQVSF 467
Query: 491 EMRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHI 610
+N P I EV + ++P + +
Sbjct: 468 NQEAVQNELMPTHIISDEVETSSTTADNNIPFSDCSTHKV 507
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +2
Query: 164 KESFKNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQN 343
KE N+ + +G+++ K +E +K + + LD L + EDL+E K+N
Sbjct: 219 KEVKNNYASMLEKNKKKGEEFIKQSEN-SKAVVEKTVQISTVLDSLQKEREDLSEIRKKN 277
Query: 344 TRRYTNMVSDVV 379
++ + +++
Sbjct: 278 EQKIEGLSQELI 289
>Z81132-14|CAB03432.3| 378|Caenorhabditis elegans Hypothetical
protein T26E4.3 protein.
Length = 378
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +2
Query: 230 KYAEQLTKVAHREQIAFEVDLDDLHEMNEDLTEAVKQNTRRYT 358
+Y + + +H +I+ V DDL+ +NE T+++K NT YT
Sbjct: 252 EYLVDIYEKSH-SRISVVVLGDDLNFVNEVFTQSIKSNTSSYT 293
>U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical
protein F54H5.3 protein.
Length = 279
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 275 AFEVDLDDLHEMNEDLTEAVKQNTRRYTNMV 367
A EVDLD ++ +L+E VK+ +Y+N+V
Sbjct: 226 AVEVDLDRQAQLVNELSERVKRGEIQYSNLV 256
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 28.7 bits (61), Expect = 5.8
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
Frame = +2
Query: 128 SKIMAMRDYTADKESFKNFFVDFCQTDDEGKKYFKYAEQLTKVAHREQIAFEVDLDDLHE 307
SK+ M + D KN + + + K ++L + ++ +A + +++L +
Sbjct: 206 SKLRDMHNQVMDLT--KNLSKEQRDREKDSKTAGDGIQRLQDMIRQQDLARQDIMNNLSK 263
Query: 308 MNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIE-HRIMLEARNHRI 484
+ E + + TRR + ++ + E+ + AKD + I M+ A++ RI
Sbjct: 264 KGDVDKEKLNEETRRLNDKINLITSEVTKKMTENQQKAKDDFNSRISVLESMIRAQSERI 323
Query: 485 ---PGEMRDPRNRYPPELIRRFEVYFKDLSTSKS 577
EMR EL + E+ K +++ K+
Sbjct: 324 VANENEMRHSFEAKLAELSGQLELAMKQITSEKA 357
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 28.7 bits (61), Expect = 5.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 342 IPEDTLIWCQTWFMKCCLIT 401
+P +I C TW CC++T
Sbjct: 711 VPPLLIIMCNTWIRSCCIVT 730
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,057,506
Number of Sequences: 27780
Number of extensions: 376752
Number of successful extensions: 1270
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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