Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E14
(868 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 149 7e-35
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 73 7e-12
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 60 7e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 54 5e-06
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 52 2e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 44 0.005
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 42 0.015
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 41 0.035
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 37 0.76
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_UPI000155C1EA Cluster: PREDICTED: similar to glutamate-... 33 7.1
UniRef50_A0TIM1 Cluster: Putative uncharacterized protein precur... 33 7.1
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 149 bits (362), Expect = 7e-35
Identities = 70/81 (86%), Positives = 71/81 (87%)
Frame = +2
Query: 551 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTVRLSPFGKRGXFLIAH 730
TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDT + FLIAH
Sbjct: 24 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAH 83
Query: 731 AVGISVRCRSFAPSWAVCTNP 793
AVGISVRCRSFAPSWAVCTNP
Sbjct: 84 AVGISVRCRSFAPSWAVCTNP 104
Score = 59.7 bits (138), Expect = 9e-08
Identities = 50/122 (40%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
Frame = +1
Query: 484 SKRPGTVKKPRCWRFSIGSAPLNEHHK---NRRSSQRWRNPTGL*RYQAFPPGSSLVRSP 654
SK+ T R RFSIGSAPL K R + ++ R+ P +L+ P
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 655 VPTLPLTGYCPPFSLREAWX--LSH----SSRCRYLSSV*VVRSKLGCVHEPPFSPTAAP 816
LP T CPPFSLREAW ++H S RCR + V C + PPFSPTAAP
Sbjct: 62 C-RLPDT--CPPFSLREAWRFLIAHAVGISVRCRSFAPSWAV-----CTN-PPFSPTAAP 112
Query: 817 YP 822
YP
Sbjct: 113 YP 114
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.3 bits (172), Expect = 7e-12
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +2
Query: 551 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
TSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 60 TSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/46 (73%), Positives = 36/46 (78%)
Frame = +2
Query: 551 TSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTVR 688
TSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP + R
Sbjct: 92 TSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLPVSFR 137
Score = 58.0 bits (134), Expect = 3e-07
Identities = 40/84 (47%), Positives = 46/84 (54%)
Frame = +1
Query: 316 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 495
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDT-RKTLSKEE 76
Query: 496 GTVKKPRCWRFSIGSAPLNEHHKN 567
+PR RFSIGSAPL K+
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKS 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 492 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 379
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 60.1 bits (139), Expect = 7e-08
Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -2
Query: 810 SGRAERGFVHTAQLGANDLHRTEIPTA*AMRKXPRFPKGER-RTVSGKRQGRNRRAHEGA 634
S RAERG + + + ++ + K PRFPKG++ VSGKRQGRNRRAHEGA
Sbjct: 21 SSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGA 80
Query: 633 SRGKRLVSL*SCRVSPPLT 577
+ K SL PPLT
Sbjct: 81 AGEKSPASLSPVGFRPPLT 99
Score = 60.1 bits (139), Expect = 7e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = -1
Query: 793 GVRAHSPAWSERPTPN*DTYSVSYEKXATLPEGRKADSIR*AAGSEQESARGSFQG 626
GVRA+SPAWSERP P+ DT SVSYEK P+G+KA+ + +G Q R + +G
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGKRQGRNRRAHEG 79
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 292 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 459
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 54.0 bits (124), Expect = 5e-06
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = +1
Query: 643 VRSPVPTLPLTGYCPPFSLREAWXLSHSSRCRYLSSV 753
+RSPVPTLPLTGY F + LSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 52.0 bits (119), Expect = 2e-05
Identities = 31/74 (41%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 578 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTVRLSPFGKRGXFLIAHAV--GISVR 751
VR GETRQD K P P + + PF G ++H+ GIS R
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPA--VSRIPVPPFSLAGSVALSHSSHSGISAR 80
Query: 752 CRSFAPSWAVCTNP 793
CRSFAPSWAV NP
Sbjct: 81 CRSFAPSWAVSKNP 94
Score = 39.9 bits (89), Expect = 0.082
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +1
Query: 685 PPFSLREAWXLSHSSRCRYLSSV*VVRSKLGCVHEPPFSPTAAPYP 822
PPFSL + LSHSS + PPFSPTAAPYP
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAPYP 104
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 94 DPDMIRYIDEFGQTTTRMQ 150
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 411 HSKAVIRLSTESGDNAGKNM 470
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +2
Query: 218 INKLTTTIAFILCFRFRVEVWEVFSALMNRPTRGERRFAYW 340
+++LT L RF V V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 42.3 bits (95), Expect = 0.015
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +2
Query: 515 VAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 664
++ +F T+ITKI Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 41.1 bits (92), Expect = 0.035
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -1
Query: 793 GVRAHSPAWSERPTPN 746
GVRAHSPAWSERPTPN
Sbjct: 27 GVRAHSPAWSERPTPN 42
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 362 ERGSGRAPNTQTASPRALADSLMQ 291
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 36.7 bits (81), Expect = 0.76
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1
Query: 793 GVRAHSPAWSERPTPN*DT 737
GV A+SPAWSERPTP+ DT
Sbjct: 27 GVLAYSPAWSERPTPSRDT 45
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.4
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 501 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 379
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 252 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 88
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI000155C1EA Cluster: PREDICTED: similar to
glutamate-rich 1; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to glutamate-rich 1 - Ornithorhynchus
anatinus
Length = 450
Score = 33.5 bits (73), Expect = 7.1
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 549 ERASQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRILSAFLPSGS 707
ER ++S L +P R ++ PW +P + + PAA +I F P GS
Sbjct: 10 ERVMERSRLVDGSTQPARLLRDMSPIPWNVPISRNRKAPAAVKIQKMFSPLGS 62
>UniRef50_A0TIM1 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia ambifaria MC40-6|Rep:
Putative uncharacterized protein precursor -
Burkholderia ambifaria MC40-6
Length = 383
Score = 33.5 bits (73), Expect = 7.1
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +1
Query: 436 PQNQGITQERT-CEQKASKRPGTVKKPRCWRFSIGSAPLNEHHKNRRSSQRWRNPTGL*R 612
P N+ Q+ + ++ + RP + +P R + + H+NRR+ + R P +
Sbjct: 145 PINRSANQQISRSARRTATRPSPIARPMRRRAACPARSARPCHRNRRTRRDRRPPVSV-- 202
Query: 613 YQAFPPGSSLVRSPVPTLPLTGYCPPFSLREAWXLSHSSRCR 738
P + VR PT G P +++R A ++ RCR
Sbjct: 203 -----PFRACVRRTAPTASAAG--PAYAVRRARAIARRPRCR 237
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.4
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 207 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 46
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,688,833
Number of Sequences: 1657284
Number of extensions: 16173062
Number of successful extensions: 44390
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 42285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44361
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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