Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_E13
(938 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 79 3e-15
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 79 3e-15
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 79 3e-15
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 79 3e-15
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 75 6e-14
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 75 6e-14
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 74 1e-13
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 74 1e-13
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 74 2e-13
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 74 2e-13
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 67 2e-11
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 66 3e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 66 5e-11
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 38 0.008
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 37 0.018
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 37 0.024
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 37 0.024
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 35 0.097
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 35 0.097
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 32 0.51
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 32 0.51
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 30 2.1
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 79.4 bits (187), Expect = 3e-15
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK+
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKS 41
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 79.4 bits (187), Expect = 3e-15
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK+
Sbjct: 7 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKS 40
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 79.4 bits (187), Expect = 3e-15
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK+
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKS 41
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 79.4 bits (187), Expect = 3e-15
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK+
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKS 41
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 75.4 bits (177), Expect = 6e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDK 282
HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQ 40
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 75.4 bits (177), Expect = 6e-14
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDK 282
HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQ 40
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 74.1 bits (174), Expect = 1e-13
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPT 276
HVGQAGVQIGNACWELYCLEHGIQPDG MPT
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPT 38
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 74.1 bits (174), Expect = 1e-13
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPT 276
HVGQAGVQIGNACWELYCLEHGIQPDG MPT
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPT 38
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 73.7 bits (173), Expect = 2e-13
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDK 282
HVGQAGVQIGNACWELYCLEHGIQPDG MP+++
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQ 40
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 73.7 bits (173), Expect = 2e-13
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDK 282
HVGQAGVQIGNACWELYCLEHGIQPDG MP+++
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQ 40
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 70.9 bits (166), Expect = 1e-12
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 279
H+GQAGVQIGNACWELYCLEHGI PDG MP D
Sbjct: 8 HIGQAGVQIGNACWELYCLEHGITPDGLMPDD 39
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 66.9 bits (156), Expect = 2e-11
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQM 270
HVGQAGVQ+GNACWELYCLEHGIQPDG +
Sbjct: 13 HVGQAGVQMGNACWELYCLEHGIQPDGMI 41
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 66.1 bits (154), Expect = 3e-11
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDG 264
HVGQAGVQIGNACWEL+CLEHGIQPDG
Sbjct: 14 HVGQAGVQIGNACWELFCLEHGIQPDG 40
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 65.7 bits (153), Expect = 5e-11
Identities = 29/35 (82%), Positives = 29/35 (82%), Gaps = 1/35 (2%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKN 285
HVGQAGVQIGNACWELYCLEHGI PDG M D N
Sbjct: 8 HVGQAGVQIGNACWELYCLEHGILPDGTSMEPDGN 42
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 56.4 bits (130), Expect = 3e-08
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +1
Query: 160 KCVSASLXHVGQAGVQIGNACWELYCLEHGIQPDG 264
+CVS H+GQAG QIGNACWELYC+EHG+ G
Sbjct: 7 ECVSI---HIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 190 GQAGVQIGNACWELYCLEHGIQPDG 264
GQ G QIG+ WE+ EHGIQPDG
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDG 34
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1
Query: 190 GQAGVQIGNACWELYCLEHGIQPDG 264
GQ G QIG+ WE+ EHGIQPDG
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDG 34
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 37.1 bits (82), Expect = 0.018
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1
Query: 190 GQAGVQIGNACWELYCLEHGIQPDG 264
GQ G QIG WE+ EHGIQPDG
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIQPDG 34
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 190 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
GQ G QIG+ WE+ EHGI P GQ D +
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSD 41
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 36.7 bits (81), Expect = 0.024
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 190 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
GQ G QIG+ WE+ EHGI P GQ D +
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSD 41
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +1
Query: 187 VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 279
VGQ G QIG WE EHG+Q DG D
Sbjct: 9 VGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +1
Query: 187 VGQAGVQIGNACWELYCLEHGIQPDGQMPTD 279
VGQ G QIG WE EHG+Q DG D
Sbjct: 9 VGQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 190 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKN 285
GQ G QIG WE+ EHGI P G D +
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIDPTGAYNGDSD 41
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQ 267
HVGQ G Q+ A W+ EHGI GQ
Sbjct: 11 HVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 184 HVGQAGVQIGNACWELYCLEHGIQPDGQ 267
HVGQ G Q+ A W+ EHGI GQ
Sbjct: 11 HVGQCGNQLAQAFWKSMVDEHGINERGQ 38
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.1
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 229 LYCLEHGIQPDG 264
++CLEHGIQPDG
Sbjct: 1 MFCLEHGIQPDG 12
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,447,500
Number of Sequences: 27780
Number of extensions: 102326
Number of successful extensions: 217
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2423194158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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