Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E12
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical...    29   4.8  
AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    29   4.8  
AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical...    29   4.8  
AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (...    29   6.4  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.1 bits (62), Expect(2) = 1.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 415 GGGGGXFSXXKKPPPPXXXXGSXXGG 492
           GGGGG       PPPP    G   GG
Sbjct: 43  GGGGGCGGGCAPPPPPPACGGGCGGG 68



 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 415 GGGGGXFSXXKKPPPPXXXXGSXXGG 492
           GGGGG       PPPP    G   GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGG 125



 Score = 20.6 bits (41), Expect(2) = 1.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 397 FFFXAXGGGGG 429
           F F + GGGGG
Sbjct: 18  FLFPSGGGGGG 28


>AL032637-18|CAE17998.1|  193|Caenorhabditis elegans Hypothetical
           protein Y43F8C.20 protein.
          Length = 193

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -1

Query: 861 RXRXGXGXSXXGPGXXNXGGLWGGSXGXRXG 769
           R   G G    GP   N GG WGG+ G   G
Sbjct: 136 RGGGGRGGDGRGPPGSNGGGDWGGNGGGGRG 166


>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +1

Query: 403 FXAXGGGGGXFSXXKKPPPPXXXXGSXXGGXXXXP 507
           F    GGGG       PPPP    G   GG    P
Sbjct: 17  FLFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPP 51


>AC025721-11|AAK29900.1|   78|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.12 protein.
          Length = 78

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 397 FFFXAXGGGGGXFSXXKKPPPP 462
           F F + GGGGG       PPPP
Sbjct: 17  FLFPSAGGGGGGCGCGAPPPPP 38


>AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (grd
           related) protein19 protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 415 GGGGGXFSXXKKPPPPXXXXGSXXGG 492
           GGGGG       PPPP    G   GG
Sbjct: 34  GGGGGGGGCCAPPPPPPVCGGCGCGG 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,982,526
Number of Sequences: 27780
Number of extensions: 148298
Number of successful extensions: 409
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)