Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E11
         (886 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   7.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   7.4  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -1

Query: 433 LSTFSKLLFNDNFLHFKICFSNICSFR 353
           L  F KLL  D     K C S +  FR
Sbjct: 376 LPGFDKLLREDQIALLKACSSEVMMFR 402


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 457 LSYRQRLFLSTFSKLLFNDNFLHFKICFSNICSFRKILFGFQFSLCLFRLKK 302
           L+Y     L +F          +F+  FS++ S   ++FG  F+L +  + K
Sbjct: 68  LTYHAIFDLISFKDSDLQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVFK 119


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -1

Query: 457 LSYRQRLFLSTFSKLLFNDNFLHFKICFSNICSFRKILFGFQFSLCLFRLKK 302
           L+Y     L +F          +F+  FS++ S   ++FG  F+L +  + K
Sbjct: 68  LTYHAIFDLISFKDSDLQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVFK 119


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 526 WTHGTNFSSSGNFRKRFRTNY 588
           WT+GT  +   N   RF+  Y
Sbjct: 141 WTNGTEVAKFKNMWTRFQLKY 161


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 526 WTHGTNFSSSGNFRKRFRTNY 588
           WT+GT  +   N   RF+  Y
Sbjct: 141 WTNGTEVAKFKNMWTRFQLKY 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,200
Number of Sequences: 336
Number of extensions: 2970
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)