Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_E11
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0173 - 23294511-23294601,23294719-23294849,23295160-232954...    49   6e-06
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580...    29   6.6  
10_01_0333 + 3675806-3676001,3676783-3677783                           29   6.6  

>04_04_0173 -
           23294511-23294601,23294719-23294849,23295160-23295483,
           23296016-23296147,23296225-23296373,23296536-23296670,
           23296997-23297090,23297199-23297318,23298096-23298182,
           23298273-23298386,23299089-23299270,23299960-23300023,
           23300191-23300337,23300636-23300845,23301048-23301217,
           23301355-23301477,23301589-23301661,23301765-23301857
          Length = 812

 Score = 48.8 bits (111), Expect = 6e-06
 Identities = 21/76 (27%), Positives = 43/76 (56%)
 Frame = +2

Query: 440 ALSIRKLNVKELITRLNHFNTNTRKDALDGLTELISAHPEILEKDLGLIIHGVSPMILNV 619
           A++ R L ++EL+ +  H+N N R+ AL+G+ +L++ HP  L+     I+  +   I + 
Sbjct: 72  AVNKRGLTLRELLQQTGHYNANVRRAALNGIKDLVAKHPSELKLHKVAIVEKLQERICDT 131

Query: 620 EKIVXHESLKVLHLIL 667
           +K+V      +L  ++
Sbjct: 132 DKVVRESLFSILQSLV 147


>11_05_0010 -
           18356835-18357080,18357475-18357672,18357780-18358046,
           18358870-18359067,18359151-18359417,18359524-18359724,
           18359807-18361363,18361499-18361859,18362602-18363467
          Length = 1386

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
 Frame = +2

Query: 437 EALSIRKLNVKELITRLNHFNTNTRKDALDGLTELISA--HPEILEKDLGLIIHGVSPMI 610
           + L I++  +KEL + + H  T   +  +D  T+L +   + E LE+ L  I   + P +
Sbjct: 592 QTLDIKQTRIKELPSTVVHL-TQLMRLMVDTWTKLPNGIGNMECLEQ-LSEIDTSMYPSL 649

Query: 611 LNVEKIVXHESLKVLHLILSNLSVEKIDPFFDVMSTFLRSAMTHI 745
           +  +++    +L+VL +++S     K + F D + +  +  + HI
Sbjct: 650 M--KELSDLPNLRVLEILISTWEQTKEEQFLDCLGSMKKLQIVHI 692


>10_01_0333 + 3675806-3676001,3676783-3677783
          Length = 398

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +2

Query: 464 VKELITRLNHFNTNTRKDALDGLTELISAHPEILEKDLGLIIHGVSPMILNVEKIVXHES 643
           +KE + R+ H  +   K  +    ELIS HPEI++K L  +   V  +   V K+    +
Sbjct: 58  LKEKMKRICH-KSGIEKRYIHLDAELISVHPEIIDKHLPSLETRVDIVATEVPKLAESAA 116

Query: 644 LKVL 655
            K +
Sbjct: 117 RKAI 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,263,946
Number of Sequences: 37544
Number of extensions: 249185
Number of successful extensions: 384
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)